Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1289 ATGAGTAGACCAACAACGCGAAGTAAAAATAAGAGACATCGACAGGGGGATGATGGCGCAGGCACGTCCGAAATATGGAGGAGAATTCATCAAACAGGTGTGGTTACTGAAGATGATATGAATCAATTGTATATGATTTGGAAGCCGGTTTGTTCAGGTTGTCGTGTAAATACCAAAGATAACCCGAATTGCTTCTGTGCATTGGTTCCACCATCGAATGGATCCAGGAAGTCTGGCCTATGGCAGAAGATGACGGATTTTATTGAAAGCCTCGGCCCTGATCCAACCAAGGATCTTCGTGCCTCCACTAATTCTCCTGCAGGTCTGACTAATCTTGGTGCGACATGTTATGCTAACAGTATACTCCAATGCTTATATATGAATAAAGCTTTCCGAGAAGGTATATTTTCCGTAGAACCAGAGGTTTTACAACAGCAGCCGGTGTTAGATCAACTGGCTCGACTTTTTGTGCAGTTGCATGTTAGTAAAAGGGCTTTCATAGATTCTTCTCCATTTGTAAAAACACTGGAGTTAGATAATGGTGTTCAGCAGGATAGCCACGAGTTCCTGACCTTGCTTCTGTCATTGCTTGAGCGTTGTCTGAGCCATTCCAAAGTTCCCAAGGCAAGAACAATAGTTCAGGATCTTTTCCGGGGAAGTGTGTCTCATGTTACAACGTGCTCAAAATGTGGAAAAGACTCTGAAGCCTCTTCAAAAATGGAAGATTTCTATGAGTTGGAGTTGAATGTAAAGGGATTGAAAAGTTTAGATCTGAGCCTGGATGATTACCTCAGTGTTGAAGAGCTTCATGGAGACAATCAATATTTCTGTGACTCATGTCAAACAAGAGTTGATGCTACTCGTAGCATCAAGCTGCGTACATTACCTGAAATACTTAATTTTCAACTTAAACGCTGTGTCTTCCTTCCAAAGACTACTACAAAGAAGAAAATTACTTCTACATTTTCATTTCCTGCTGAACTTGATATGCGGCATAGATTGTCTGAGTTGTCTCAAGTTGATTTGATATATGATTTGTCAGCTGTACTGATTCACAAGGGAACAGGTGTTAACAGTGGCCATTACATTGCTCACATCAAGGATGAAAACACTGGGCAGTGGTGGGAATTTGATGATGAGTGTGTCACTAATTTGGGTAACCATCCCTTTGGTGAAGGTTGTTCAAGTTCAACTTCTAAATCTGTTAAGACTGATGCAGTTCACTCTGATTGTTCCAAAGCAAGGATGGCTGACAGTAATGGAAACAATTTGGATGACACTTGTTCACAATCATCACTTCTGGGGACATTTTCTTCTAGTGATGCATACATGTTGATGTACCATCTTAAACATACAAAAGATATACATGGAAATGGGGATATAGTTAATGGTGCTAACGAAGAAACAAGAGAGGATATTGCACAAGACAGTGCTCTTCCTTCTCATCTTTTTGACGAGATTGGAAATTTCAATGCATCATATCTTGATGCGTGTGAGCAGTACAATCGTAGGAAAGAGTTAGAATTGAGTCGTATTAATGAGAGGAGACAGGAAGTCCGATCTGTTATAGCTGAAGCTCCTGTTCAACCACTAGAGCAACCATTTTATTGGATTTCTAGTGATTGGCTTCGCCAGTGGGCTGACAACGTTATTCCAATTTCTCTTGATAACACATCCATCCAATGTTCACATGGGAAGGTCTCAGCTTCGAAGGTTGCCTCAATGAAGCGATTGTCAGCTAAAGCATGGGATAAACTGTTCTCTAAGTATGGTGGGGGGGCAGCACTGTCTAATGATGACCACTGTTTGGATTGTCTGATTCTTGGGGCTCACACGGTGGTGTCAGCTGACACCTATCGGGATAGAAGAGAATCAATGAAGTTACTTGCACGGGACATTCTAGATGGAAACTGTATAGATGGAAAATACTACATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGCTGGACTAACAGCAGCCATCTGTTGTCCACATGGGCAACTGATGCCTGAGCAAGCTGCTGGTGCCAAGCGGGTTCTTGTTCCTGAGTGTTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTAAAGTCCGATGATCCCTTGGGTGGTCCTACTTTTCCTTCTGACTCAATGGAGTGTTCCCAATGCAGTAATGAATTATCTGAAGTAGCATGCTTGGAGGACTCCTTAAGATTAGTTAAACAAATGCAGCGTCAGAACCATGACAAATTATTCCAGGCTAAAAGTTTGCCACTGTCTGTTCAGTGCAAGTATTTCTTGGTGCCTTCTTCATGGATCTCAAAATGGAGAAATTATGTTAGTCCAACCCTCAAGAGTTCAGATAAACCTGAAACTTTAGATGGGGTAATTGACTCACTATTGTGTGAAAAGCACTCGCAACTTGTTGAAAGACCTCATGAACTGGTTTTCAGACGCGGTGCTATATTCCAGAGAGAATCTTCTGCTGGTGGCTTAACCATCATATCTGATAATGATTGGAAATGCTTCTGTAAAGAGTATGATGGTATTGAGACCAAAGGAATATCTGCAACAATTGAGATCATTAATGATTCAGAGAATGTTCTGAATGGATCGGGTGAAGAGATGCCAATATGTGAGGATCAGTTGGTCAATGGGGATAAAGTGAGTAATGAAAATGGGACTGGACAAATTCTGGTCAAGACATGTCCTGAGGTCTGTGAAAGTTGCATTGGGGAAAGAGAAAGTTGTGAGTTAATGCAGAAACTTAATTATTGCAATGAGGACATAAGTGTAATTCTTGTTCGTGGTAAGGAAGTACCTAGATCAATCTTGGAAGCCTCAAAGGGATCTGTTGAAACAGACCGTCGAGTTTCCAAGCGCTCACGGAAGACTAGGAATGGGAGTTCAATTAATTTGAAAGTTTCTGCTTCAACATCTCTATACCAACTGAAAATGATGCTATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACAGAAAGGCGACAAGACAATCGATATCGATGATGAATGTGCTACTCTTGCGGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCTGAGATCCACGAAAATCGCGATATCGCTGATGAGCTTTGTGATGAGAAAATGGATCTGCAGCATACCGAGGAAGGATTTCGCGGAACACTTCTGACGGCGAACTATTCATCGCAGGTTGTCTAA 3240 0.4167 MSRPTTRSKNKRHRQGDDGAGTSEIWRRIHQTGVVTEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPSNGSRKSGLWQKMTDFIESLGPDPTKDLRASTNSPAGLTNLGATCYANSILQCLYMNKAFREGIFSVEPEVLQQQPVLDQLARLFVQLHVSKRAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSKCGKDSEASSKMEDFYELELNVKGLKSLDLSLDDYLSVEELHGDNQYFCDSCQTRVDATRSIKLRTLPEILNFQLKRCVFLPKTTTKKKITSTFSFPAELDMRHRLSELSQVDLIYDLSAVLIHKGTGVNSGHYIAHIKDENTGQWWEFDDECVTNLGNHPFGEGCSSSTSKSVKTDAVHSDCSKARMADSNGNNLDDTCSQSSLLGTFSSSDAYMLMYHLKHTKDIHGNGDIVNGANEETREDIAQDSALPSHLFDEIGNFNASYLDACEQYNRRKELELSRINERRQEVRSVIAEAPVQPLEQPFYWISSDWLRQWADNVIPISLDNTSIQCSHGKVSASKVASMKRLSAKAWDKLFSKYGGGAALSNDDHCLDCLILGAHTVVSADTYRDRRESMKLLARDILDGNCIDGKYYISRPWLQQWWKRKVLDAPSEADAGLTAAICCPHGQLMPEQAAGAKRVLVPECFWLFLYEDAVSVKSDDPLGGPTFPSDSMECSQCSNELSEVACLEDSLRLVKQMQRQNHDKLFQAKSLPLSVQCKYFLVPSSWISKWRNYVSPTLKSSDKPETLDGVIDSLLCEKHSQLVERPHELVFRRGAIFQRESSAGGLTIISDNDWKCFCKEYDGIETKGISATIEIINDSENVLNGSGEEMPICEDQLVNGDKVSNENGTGQILVKTCPEVCESCIGERESCELMQKLNYCNEDISVILVRGKEVPRSILEASKGSVETDRRVSKRSRKTRNGSSINLKVSASTSLYQLKMMLWESFGVVKENQILQKGDKTIDIDDECATLADVNIFAGDQIIVRDSEIHENRDIADELCDEKMDLQHTEEGFRGTLLTANYSSQVV* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1289 1079 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
Aev08g1289 1079 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Aev08g1289 1079 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1049 - -
Aev08g1289 1079 ProSiteProfiles DUSP domain profile. 617 724 IPR006615 GO:0004843
Aev08g1289 1079 SUPERFAMILY DUSP-like 512 598 IPR035927 -
Aev08g1289 1079 SMART dusp 528 604 IPR006615 GO:0004843
Aev08g1289 1079 Gene3D Cysteine proteinases 93 450 - -
Aev08g1289 1079 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Aev08g1289 1079 SUPERFAMILY Cysteine proteinases 104 452 IPR038765 -
Aev08g1289 1079 ProSiteProfiles DUSP domain profile. 745 865 IPR006615 GO:0004843
Aev08g1289 1079 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1049 - -
Aev08g1289 1079 Gene3D - 968 1039 - -
Aev08g1289 1079 Gene3D - 742 861 IPR035927 -
Aev08g1289 1079 MobiDBLite consensus disorder prediction 1 24 - -
Aev08g1289 1079 CDD Ubl_USP48 969 1070 IPR044743 GO:0004197|GO:0004843|GO:0016579
Aev08g1289 1079 SUPERFAMILY Ubiquitin-like 971 1038 IPR029071 -
Aev08g1289 1079 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Aev08g1289 1079 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Aev08g1289 1079 Gene3D - 502 600 IPR035927 -
Aev08g1289 1079 ProSiteProfiles DUSP domain profile. 510 602 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1289 Aev-Chr8 8106232 8112307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1289 105 379 Miscellaneous Gene Families AT4G31670 31.081 3.52e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1289 - - gmx:100815770 1825.06