Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1288 ATGGCAAAATTTCATCTCTGCAAAACACCATTTCCATATCTTTACCCCAAAACCAGCATCACTATAATCTTCAGAAAAATCCCAACAACAACAAAAGGAATTCTGCTCCGGAATCGATTCTCGATCTCAGCCACCATGACTTCAGCCTCTTCATCATCGATACAGGTGCCGCAGCAAGATTCCAACGAAATGGAGCGCATTGTAGACCATACATTCCGAAGGTACACGTCAGAAAATGCCAAGAGGATTGCTAAAGGAAAAGGAACCGCCATTGTTTGGTTCAGAAACGATCTCAGAGTGTTGGACAATGAAGCTCTCTTTAAAGCATGGGTTTCCTCTGATAATGTTTTACCTGTATATTGTATTGATCCTAGACTCTTTGCCACCACTTATCATTTTGGATTCCCAAAAACTGGAGCACTGAGAGCGCAATTTATCCTAGAATGCTTGGCTGACTTGAGGAAGAATTTGATGAAATGGGGACTTAATTTGCTTATTCAACATGGGAAGCCTGAAGATATTCTTCCTTCTCTAGCGAAATCTTTTAAAGCTCATACAGTTTATGCCCAGAAAGAAACTTGCAGTGAGGAGTTGAATGTTGAAAGGTCAGTTAGCAAAGGTCTTAAACAAGTAGAGATACAATCTGACGAATTTGCAAAGTTGCAATTGATTTGGGGTACCACCATGTATCACATTGATGACCTCACTTTTGATGCTGCTGATTTGCCTGATGTGTATACACAATTTCGTAAGACTGTTGAAGCCAAATGTGTGATCCGCGAATGTATCAAACTCCCTGCATCTCTCGGACCGCCTCCACTAGTTGAGGATTGGGGATGTATTCCTTCATTAGAGCAGCTGGGACTTAGCTCACAGAATGTTAGCAAGGGGATGAAATTCGTGGGTGGTGAAAGTGCGGCACTGAGCAGAGTATATGAATATTTTTGGAAGAAGGATTTGCTAAAGATTTACAAAGAGACCAGAAATGGAATGTTAGGGCCTGATTACTCTACTAAGTTCTCACCGTGGCTCGCCTCAGGAAGTTTGTCTCCTCGTTTCATACATGAAGAGGTGAAACGATATGAGAACGAAAGGCTGGCAAACAGTTCTACATACTGGGTTTTGTTCGAGTTGATATGGAGGGACTACTTCAGGTTTTTATCAGTCAAATATGGGAATTCCCTTTTCCATTTAGGTGGCCCTAGGAAAGTTCAGCGCTATTGGAGCCAAGACAAGATTTTGTTTGAATCCTGGAGGGACGGTCGGACAGGGTATCCTCTAATAGATGCCAACATGAAGGAACTAAAAACTACAGGGTTTATGTCGAACCGAGGACGGCAGATTGTGTGTTCCTTTCTTGTTCGTGATATGGGCATAGACTGGCGCATGGGAGCAGAGTGGTTCGAGACGTGTCTTTTGGATTATGACCCGTGCTCTAATTATGGAAACTGGACTTATGGATCAGGAGTTGGGAATGATCCTAGAGAAGACCGATACTTCAGCATACCGAAACAAGCACAAACATATGACCCTGAAGGTGAATATGTTGCATACTGGTTACCACAGTTAAGAACAGTTCCAAAAGAGAAAAGGAACTTCCCTGGGAATTTATACATACGTCAAATTGTGCCTCTCAAGTTTGGAACAACTAGTAGACACCATAATCAGGATAAGTCCACTGGAAATAGGAAAGGTATGGCTGATGACAAAGCAGTTGGGGAAGGTGAGAAGAAAGAGGCAAGTCCTACTACAGCCACTGAGAATGTAAAGAAGAAGCAGAAGGGGTTCATTTCCCGAATGTGGAATGGTATATTTAGGTCACATAGGGATGATTTTGAGAAGAGGCTCCAGTATATTTCCAAAGAGGAAGCTGCAGTTCTTTCTAGATTGAGCAAAAGGTCCCGATCATGGAGGCGGATATCATGGAATATTATTATATTTTCTGTTATATTTGAGGTCATTGCTATAGTCTATGCTATCATGACAACAAGATCAGTGGATATGAATTGGAAAATGAGGGCTTTCCGGGTTTTGCCAATGTTTCTTGTGCCTGCATTGGCATCTGCTGCATATTCAACATTTGTCAGCTTCACAAGAATTTGTGATCACAGGGACCAGAAACTTCTTGAAAGGCTTCGTGCTGAAAGGCAAGAGAAAATTAATGAGCTAAAAGAGAAGACAAATTATTACAGTACACAACAGCTCATTCAGAGATATGACCCAGACCCTGCTGCAAAGGCTGCTGCTGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGTTTGAAACTGTACATGGGAGATGAATCTTATCTCGGTGATCCAATGGGGAAGAGCAATGATGTTGAACTTGTGAAGTCCAGTGGACTCCGAAACCGAAAGCAAGTTCTCTCTAGATCCGCCAGTTCAGAGACAGTTATTTCAAATCATCCTGATCAAAAGTTTGTTGGGCCAGGGGCAATTGACCAAACTGAGGCTACCGAGTATAATCAGCTTGTTGTTGAACACCAGCCCCAAAGTTCCTCCGCACAAGATGGAGGATGGATTGCTAGAATTGCAGCAATGCTTGTGGGTGAGGATCCAACCCAGTCTTATGCTCTCATATGCGGCAACTGTCATATGCATAATGGTCTAGTTCGGAGGGAGGATTTCCCATTTGTAACTTACTACTGCCCGCACTGTCGTGCCCTGAACCAACCAAAGCATTTGGATGAAAGTAACACTACTCGTAATTCCCCAAACATGGCATCTCCAAAAACATGCGATAGCGAGGCAGTTAGAAATGTCAGCACTTCTGATTCTGCGGCTGAGAGCATAATCACTAGTGATAGTCCCGTAAATGCTAGTGCTTCTGCAACTGGGAGCATAATAGAAAGCAATAGTCCCATAAATGCTATCCCTGAGATTGAGGAAGAAACAGAAAAGGAAACTTTGGAGGATAAAGCTAGTTGA 2955 0.4277 MAKFHLCKTPFPYLYPKTSITIIFRKIPTTTKGILLRNRFSISATMTSASSSSIQVPQQDSNEMERIVDHTFRRYTSENAKRIAKGKGTAIVWFRNDLRVLDNEALFKAWVSSDNVLPVYCIDPRLFATTYHFGFPKTGALRAQFILECLADLRKNLMKWGLNLLIQHGKPEDILPSLAKSFKAHTVYAQKETCSEELNVERSVSKGLKQVEIQSDEFAKLQLIWGTTMYHIDDLTFDAADLPDVYTQFRKTVEAKCVIRECIKLPASLGPPPLVEDWGCIPSLEQLGLSSQNVSKGMKFVGGESAALSRVYEYFWKKDLLKIYKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRKVQRYWSQDKILFESWRDGRTGYPLIDANMKELKTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRTVPKEKRNFPGNLYIRQIVPLKFGTTSRHHNQDKSTGNRKGMADDKAVGEGEKKEASPTTATENVKKKQKGFISRMWNGIFRSHRDDFEKRLQYISKEEAAVLSRLSKRSRSWRRISWNIIIFSVIFEVIAIVYAIMTTRSVDMNWKMRAFRVLPMFLVPALASAAYSTFVSFTRICDHRDQKLLERLRAERQEKINELKEKTNYYSTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKLYMGDESYLGDPMGKSNDVELVKSSGLRNRKQVLSRSASSETVISNHPDQKFVGPGAIDQTEATEYNQLVVEHQPQSSSAQDGGWIARIAAMLVGEDPTQSYALICGNCHMHNGLVRREDFPFVTYYCPHCRALNQPKHLDESNTTRNSPNMASPKTCDSEAVRNVSTSDSAAESIITSDSPVNASASATGSIIESNSPINAIPEIEEETEKETLEDKAS* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1288 984 MobiDBLite consensus disorder prediction 904 984 - -
Aev08g1288 984 TIGRFAM crypto_DASH: cryptochrome, DASH family 89 522 IPR014133 GO:0003913|GO:0006281
Aev08g1288 984 Coils Coil 706 729 - -
Aev08g1288 984 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 87 278 IPR036155 -
Aev08g1288 984 MobiDBLite consensus disorder prediction 550 589 - -
Aev08g1288 984 Gene3D - 227 396 - -
Aev08g1288 984 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 397 551 - -
Aev08g1288 984 MobiDBLite consensus disorder prediction 969 984 - -
Aev08g1288 984 MobiDBLite consensus disorder prediction 904 963 - -
Aev08g1288 984 Pfam FAD binding domain of DNA photolyase 376 532 IPR005101 -
Aev08g1288 984 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 298 535 IPR036134 -
Aev08g1288 984 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 88 223 IPR006050 -
Aev08g1288 984 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 849 899 IPR019273 -
Aev08g1288 984 PRINTS DNA photolyase signature 443 461 IPR002081 -
Aev08g1288 984 PRINTS DNA photolyase signature 482 496 IPR002081 -
Aev08g1288 984 PRINTS DNA photolyase signature 423 439 IPR002081 -
Aev08g1288 984 MobiDBLite consensus disorder prediction 551 585 - -
Aev08g1288 984 PANTHER CRYPTOCHROME DASH 73 585 - -
Aev08g1288 984 Gene3D HUPs 51 226 IPR014729 -
Aev08g1288 984 PANTHER CRYPTOCHROME 73 585 IPR002081 -
Aev08g1288 984 Pfam DNA photolyase 90 258 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1288 Aev-Chr8 8095239 8102806 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1288 K25656 - gmx:100783312 925.62