Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1246 ATGGGAATAACAGAGGCATGTTCAAGATTGATTGGGGACTTTCTGCAAGCATATTTCAAACCACAAAGCTCAATATCTTCTCCTCCTACATGCAAGCCCCTTAATAAGCTTGATGACAGCATGGTTCGTGCTCTTGTTACTGTGTTTGGAATGCAAAACAATGGGAGGATCAAGAAGGAGAACGCAAGGCAAGTTGTGGAGAAGCTTGGTTTGATGCATAATGACTATGTTGATGATGAGGAGGAGGATGAAGTTGGTGTGGAAGAGGTTCTTGGGGAATTGGAGGAGGAGGACATGTCAAAGCGGAATGAGCTGTTGCATGAGGCATTCAAGATCTTTGATGAGGATGGGGATGGATACATTGATGCGATGGAGTTGAAGAGGGTGCTTGATTGCTTGGGTTTGGACAGAGGTTGGGACATTACCACAATTCAGAATATGGTTAAGGTTGCTGATTTGAACCTTGATGGAAAGGTTGATTTTGCTGAGTTTCAATTCATGATGGGGTAG 510 0.4373 MGITEACSRLIGDFLQAYFKPQSSISSPPTCKPLNKLDDSMVRALVTVFGMQNNGRIKKENARQVVEKLGLMHNDYVDDEEEDEVGVEEVLGELEEEDMSKRNELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDRGWDITTIQNMVKVADLNLDGKVDFAEFQFMMG* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1246 169 Coils Coil 77 97 - -
Aev08g1246 169 CDD EFh 106 168 IPR002048 GO:0005509
Aev08g1246 169 PANTHER CALCIUM-BINDING PROTEIN CML42 41 168 - -
Aev08g1246 169 SUPERFAMILY EF-hand 32 168 IPR011992 -
Aev08g1246 169 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 41 168 - -
Aev08g1246 169 Gene3D - 15 169 - -
Aev08g1246 169 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Aev08g1246 169 SMART efh_1 105 133 IPR002048 GO:0005509
Aev08g1246 169 SMART efh_1 143 169 IPR002048 GO:0005509
Aev08g1246 169 Pfam EF-hand domain pair 105 168 IPR002048 GO:0005509
Aev08g1246 169 ProSiteProfiles EF-hand calcium-binding domain profile. 139 169 IPR002048 GO:0005509
Aev08g1246 169 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1246 Aev-Chr8 7836773 7837282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1246 59 167 EF-hand Containing Proteins AT3G29000 40.909 3.12e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1246 - - adu:107470962 219.55