Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1234 ATGGTTCTTCTTCAGCTCCCAAAATTCCCTCTCTCCAATATCCTAACCCCATCTTCAAACTCCCTCCTCTTCCTCCGCCCCCACTCCACCCCTCTCCACCTCTTCTCTGCACCCAGGTGCACTCTAACCCTCCCCACCTCAGAACCCACACCCTTACCTCTCGACGCACCCTCACGTGCCCCTCACGTGGAGCTCCCCCTCCACAAACTCTTCGTTCCCCCTGAAACCCATGTACCCGTCGACACCGCCGCCAGAATCCTCAAGGGATCCAACATAGTCCTCAGCAAGTACGCCACCGATGCTCAGGTGATGCAAGCGGAGTTCATAAAAAGCAGTGTCAGGACGGAGGATTGCCCCTCCGATGGCCTCCCGGAGTTCGCCCTCGTCGGACGCTCCAACGTCGGCAAATCGTCGCTGCTCAACTCCCTCGTGCGCCGCAAGAAGCTAGCTTTGACATCTAAGAAGCCAGGCAAGACACAGTGTATTAACCATTTTCGTATTAATGATAGCTGGTACCTGGTGGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAACTTAGAATGGATTGGGAAAAATTCACCAAGGACTATTTCCTTAACCGCTCATCGTTAGTTTCAGTTTTCCTTCTAATAGACGCAAGCATCCCTGCCAAGAAAATTGATCTCGAGTATGCTAGTTGGTTGGGGCAGAACCAGATCCCAATGACAATAATCTTCACGAAATGTGACAAGCGGAAGAAGAAAAAGAATGGAGGCAAAAGACCAGAAGAAAATGTTGATGATTTTCAGGAATTGATACGTGACTTCTTTGAAACAGTGCCACCATGGATCATGACCAGTAGTGTTACCAATCAGGGTCGTGATGAGATACTCCTCCACATGGCTCAGCTTAGGAATTACTGGCTCAAGCACTAG 921 0.5049 MVLLQLPKFPLSNILTPSSNSLLFLRPHSTPLHLFSAPRCTLTLPTSEPTPLPLDAPSRAPHVELPLHKLFVPPETHVPVDTAARILKGSNIVLSKYATDAQVMQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPQELRMDWEKFTKDYFLNRSSLVSVFLLIDASIPAKKIDLEYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVDDFQELIRDFFETVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1234 306 Pfam 50S ribosome-binding GTPase 126 243 IPR006073 GO:0005525
Aev08g1234 306 CDD YihA_EngB 125 299 IPR030393 GO:0005525
Aev08g1234 306 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 122 302 IPR030393 GO:0005525
Aev08g1234 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 302 IPR027417 -
Aev08g1234 306 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 106 294 IPR019987 GO:0005525
Aev08g1234 306 Hamap Probable GTP-binding protein EngB [engB]. 111 300 IPR019987 GO:0005525
Aev08g1234 306 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 68 303 - -
Aev08g1234 306 Gene3D - 97 302 IPR027417 -
Aev08g1234 306 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 68 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1234 Aev-Chr8 7733113 7735019 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1234 K03978 - tcc:18587923 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1234 08 7733113 7735019 Aev08g1234 08 7733113 7735019 ECH