Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1212 ATGGCATCAATTAGAAGAACTTTGTCTCCAGTGCCTCGAGGTGGAAATGCGGCTAATGTAGAAGTCTCTTCAGTAGGTTCTCCCTTGTCTAGGTCCTCATCGAGTCCTCATAGCTCAGTCAGCGCACTGGATTCACGTGCTTTTATGCTTGGTCTTTTCTCCCCGAGATCTTTGAGGGCCCTTGAGAAGTCAAAGCCAAAGGGCCAGCTTTGGAGGAAAGTGATTTTGCATTTCTTCATTTGTTTCTTGGTTGGTGTTTCCATCGGATTCATCCCATTTGCATCAAGGAACTTGTCCACTAGTCTTAAGCCAAAGCAGCAAGCCTTCTCTTATGAGATGATTTCTGCAGTTGGAAATCTTCAGCAATTTGAGGATACTTTAAAATTGGTCCCACCTCCATTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCTGAAATCTTGAGGAGTAGTGGGATTATGTACAGGCATCTCATTTGCAAATCAAATATAACCAACATGATTCATCAGAGCATTCTTCAAAGAAATGTTGCGCTAACTCACATTGAAACTCACCGTCTTGACGGAATTCTTTACTTTGCTGATGATGATAACATCTACTCAGTGGAGCTGTTTCAGCAAATGAGAGAAATAAGGCGATTTGGAACATGGGTTGTAGCAAAACTATCAGGGGATAAAAGTAGCATTGTCTTTCAAGGGCCCATTTGTAACGGAAGTCGAGTAATCGGATGGCACATTAATGAACCAAATTGGAGACCTAGACGATTTCATGCTGAGATGTCGGGTTTTGCCTTCAACAGTACAATAATCTGGGATCCAAAGAGGTGGCACCGGCCCACTCTTGAACCTATCAGGCAACTTGACACAGTCAAGGAAGGTTTCTGGGTTAGTACATTGATTGAGCAGATTGTTGAAGATGAAAGTCAAATGGAAGGCTTGATGAACAACTGCTCGAGCGTAATGGTTTGGCATATGGCTCTTGAATCGTCTCATTCTTTCTACCCTCAGAGATGGATCATCAAGAATAACCTAGACGTCATTCTTCCGCTCCCGGGAGATTCTTGA 1077 0.4308 MASIRRTLSPVPRGGNAANVEVSSVGSPLSRSSSSPHSSVSALDSRAFMLGLFSPRSLRALEKSKPKGQLWRKVILHFFICFLVGVSIGFIPFASRNLSTSLKPKQQAFSYEMISAVGNLQQFEDTLKLVPPPLLWIVVEMTSQSEETAEILRSSGIMYRHLICKSNITNMIHQSILQRNVALTHIETHRLDGILYFADDDNIYSVELFQQMREIRRFGTWVVAKLSGDKSSIVFQGPICNGSRVIGWHINEPNWRPRRFHAEMSGFAFNSTIIWDPKRWHRPTLEPIRQLDTVKEGFWVSTLIEQIVEDESQMEGLMNNCSSVMVWHMALESSHSFYPQRWIIKNNLDVILPLPGDS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1212 358 SUPERFAMILY Nucleotide-diphospho-sugar transferases 119 347 IPR029044 -
Aev08g1212 358 Pfam Glycosyltransferase family 43 125 331 IPR005027 GO:0015018|GO:0016020
Aev08g1212 358 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 120 351 IPR005027 GO:0015018|GO:0016020
Aev08g1212 358 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 41 125 IPR005027 GO:0015018|GO:0016020
Aev08g1212 358 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 110 347 IPR029044 -
Aev08g1212 358 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 120 351 - -
Aev08g1212 358 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 41 125 - -
Aev08g1212 358 CDD GlcAT-I 126 332 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1212 Aev-Chr8 7590892 7593092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1212 1 354 Glycosyltransferase AT1G27600 43.596 5.10e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1212 K20869 - gmx:100808765 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1212 08 7590892 7593092 Aev08g1212 08 7590892 7593092 ECH