Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1204 ATGACTGATCAACACATACAAGAAGACCATCTTGTTGATAACTATGATGTTCAATTTACCTCTCCAAGGCCATCATCGAGTTCTGATACAATGTTCCCAACACCATGTCCTGATTCACCATGGACACTTTCCTCTCCTCTCCCAAGGAACCCTTCCCCTTCCCCTTCCCCTTCTTCTTCTTCTTCTCCTCCTTCTGTTATCTACCACTGCATAGCCTCACTCCACCGCCACGAAGGCAGCATCTATGCCATCGCAGCTTCCAAAGGCTTGGTCTTCACCGGCACCAGCAGCAGCAGAATCCATGTGTGGAAGCAACCTGATTGCATGGACAAAGGGTGCCTCAAAACCAGCTCTGGCGAAGTCAGAGCCATTCTGGCTCATAGCAACACTCTGTTTTCAACACACAAAGACCAAAAAATAAGAGTATGGAACTTCACCTCTACTCTCTCCTCCGAAACCTTCAAGTCCAAGAAAGTAGCTACCCTCCCTAGAAAAACCTCCTTGTTACTTCCCATGTTCCCAATCAGAGGAAATAGCCACCACACACAGAAACACAAGGACTCTGTTTCTTGCATGGCTTATTACCATTCCGAAGGGCTATTATACACTGGCTCCCACGACAGAACAGTGAAGGCTTGGAAGGTATCTGAAAGAAAGTGCGTCGATTCATTCGTGGCGCATGAAGATTGCATAAACTCGATGTTGGTGAACCAAGACGATGGTTCTCTGTTCACTTCATCTTCCGATGGTTCAGTGAAGATATGGAGAAGGGTGTACACTGAATACACTCACACCCTCACAATGACGCTCAAATTCCAACCTTCACCGGTGAATGCGCTGGCAATAAGCTCATCGTTCAGAAATTGTTTGCTCTATTCAGGGTCTTCGGACGGAATGATAAATTTCTGGGAGAAGGAGAGGCTCTGTTACAGGTTCAACCACGGTGGGTTCTTGCAGGGCCACCGTTTTGGGGTGCTCTGTTTGGCCACAGTTGGGAGTAATATGGTGTTCAGTGGGTCGGAGGATACGACCATAAGGGTGTGGAGAAGGGACAAGATGAGCTGCTACCACGAGTGTCTGGTCGTGTTGGATGGGCATAGGGGGCCAGTGAGGTGCTTGGCAGCGTGCCTTGAGATGGAGAAAGTTGTGAAGGGGTTGTTGGTCTATAGTGCTAGCTTGGACCAGACGTTTAAGGTTTGGAGGATTAAGGTTGCGGATGATGATGATGATGAAGATGTAATGTGCTTTGAATATGGTGGTGGGAGAGGGTCCAAGATTAGGGCTAGGGAGTATGATTATGATATGAGCCCGGTTTTGTCACCTTCTTGGGTGGAGAAGAAGCTACAAGCTACCTACTTCCAGTAG 1365 0.4799 MTDQHIQEDHLVDNYDVQFTSPRPSSSSDTMFPTPCPDSPWTLSSPLPRNPSPSPSPSSSSSPPSVIYHCIASLHRHEGSIYAIAASKGLVFTGTSSSRIHVWKQPDCMDKGCLKTSSGEVRAILAHSNTLFSTHKDQKIRVWNFTSTLSSETFKSKKVATLPRKTSLLLPMFPIRGNSHHTQKHKDSVSCMAYYHSEGLLYTGSHDRTVKAWKVSERKCVDSFVAHEDCINSMLVNQDDGSLFTSSSDGSVKIWRRVYTEYTHTLTMTLKFQPSPVNALAISSSFRNCLLYSGSSDGMINFWEKERLCYRFNHGGFLQGHRFGVLCLATVGSNMVFSGSEDTTIRVWRRDKMSCYHECLVVLDGHRGPVRCLAACLEMEKVVKGLLVYSASLDQTFKVWRIKVADDDDDEDVMCFEYGGGRGSKIRAREYDYDMSPVLSPSWVEKKLQATYFQ* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1204 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 318 348 IPR001680 GO:0005515
Aev08g1204 454 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 16 447 IPR045182 -
Aev08g1204 454 SMART WD40_4 217 256 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 356 401 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 107 144 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 176 214 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 263 304 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 311 349 IPR001680 GO:0005515
Aev08g1204 454 SMART WD40_4 67 104 IPR001680 GO:0005515
Aev08g1204 454 Gene3D - 57 168 IPR015943 GO:0005515
Aev08g1204 454 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 182 216 - -
Aev08g1204 454 Gene3D - 178 314 IPR015943 GO:0005515
Aev08g1204 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 255 IPR001680 GO:0005515
Aev08g1204 454 MobiDBLite consensus disorder prediction 39 60 - -
Aev08g1204 454 Gene3D - 315 439 IPR015943 GO:0005515
Aev08g1204 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 182 223 IPR001680 GO:0005515
Aev08g1204 454 MobiDBLite consensus disorder prediction 18 38 - -
Aev08g1204 454 Pfam WD domain, G-beta repeat 219 255 IPR001680 GO:0005515
Aev08g1204 454 Pfam WD domain, G-beta repeat 317 348 IPR001680 GO:0005515
Aev08g1204 454 Pfam WD domain, G-beta repeat 358 400 IPR001680 GO:0005515
Aev08g1204 454 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Aev08g1204 454 PRINTS G protein beta WD-40 repeat signature 201 215 IPR020472 -
Aev08g1204 454 PRINTS G protein beta WD-40 repeat signature 336 350 IPR020472 -
Aev08g1204 454 PRINTS G protein beta WD-40 repeat signature 131 145 IPR020472 -
Aev08g1204 454 SUPERFAMILY WD40 repeat-like 69 400 IPR036322 GO:0005515
Aev08g1204 454 MobiDBLite consensus disorder prediction 1 63 - -
Aev08g1204 454 PANTHER OS01G0232200 PROTEIN 16 447 - -
Aev08g1204 454 CDD WD40 70 401 - -
Aev08g1204 454 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1204 Aev-Chr8 7548237 7549601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1204 185 439 Miscellaneous Gene Families AT5G08390 22.727 4.96e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1204 - - adu:107470716 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1204 08 7548237 7549601 Aev08g1204 08 7548237 7549601 ECH