Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1193 ATGGAAGACGCCGGAAAATTTCCTAACTCCGGCAACCTCTCGCGGAAGATCGTCGCCGCAGCTGCTGGGGAATCACACACGCTGGTTCTTGCCGGGGATGGGAGTGTGTACTCGTGGGGTAGAGGAATGTTTGGGCGGCTTGGCCATGGATCAGAAAAAGATGAGCTTTCACCAGTTCAAGTCAAGTTTCAAAACCCCAATGGAGGAGGAGACACTCCCAAAATCGTCGCAATTGCTGCTGGTTCTTATCATAGTCTTGCTCTAGCAGATGATGGATCTGTTTGGTGCTGGGGTTACAATATCTGTATCCTTAATGTGCTCTTGAGTCACTTGAGGGAATTCAGTTACAGATATTGCTTGTTTTTACTTCTAGAACCTGATTCTTCAATAGGTGTATCTGAAACAGAAGGCAAATCATCAATAAAGATAAGTGCTGTTAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAATCATGGTGTCCTTTGGGTGTGGGGAAACTGCCCGCAACAAAGCATAGAAGGCAGTGTTTCTCTTGTAAGCAGCTTCAGTCCAACACCGGTGTTGGATTTTCACGGTCGCAGTGTTGTCAAGGTTGCATGTGGAAATGAACATGTTGTAGCACTGGTCGGTGCCGGAGAATCATATGAGGGAGAAGATCTAGTGTGTTACTCTTGGGGTTGTAACAGCCATGGCCAGTTAGGCTTGGGAGATAGGGAGAACAGGCTGCATCCAGAAGTTGTGAAAACATTTGATGAGGAGTCCCCTTGGACAATTTATGATGTAGCTTGTGGAGCCTATCACACTGCTTTGCTCACTCGCAAAAAGAATTCAACTGACAAATCAGAAAGCAAGTGCTGGACTTTTGGCCTTGGAGAAAATGGCCAACTTGGGCATGGAACAACACAAAGCTCATTATTTCCAACACCTGTTCAAGACTTGCCTCAAAATATGTATCTTATTGGTGTTGGTTGCGGCTTGTTTCATACAAGTGTTGTTTCCTCGGAGGGGGATGTGTGGTCGTGGGGAATGGAGAAGGGTCTTGGCTTATGTCCTGGTGCTACTCATGCTGGAACAGATTCAGGTGATGCCCTTTCTCCCCTGCTTATACCATGCCAGCCACATCAACCTAAATTTCCAGATCCAGTTCAAGTCGCGTGCGGGGCTGCACATACCATTATCGTCGGGCAGGAGGGATACAAGGTGTGGTCTTGGGGTAGAGGAAGGAGTGGAGTTCTTGGAATTGGCAACGAAATCGATTGTTATGCTCCCACTATGGTGATGTGGCCTCCAATGACGGACGATTTCAAGGAAGAGGAATCAAGGAGCTCCGAGGAGCAAGACAAGACGAAAGAGAAGGAGAAGGAGAAGGAAGCATCAGCAGAAACAGATGAGAAATTATCCTCAGCATTGAATGAGGTGAAGCTGCTTCAAACAAAGCTATCAACAATGGAAAGATATGCTAGTATACTCCATGGTTGCATCTTCAGAAAACCTTTTGATGAACAAGATATCCCTGCATCATTGAGGGATTCAGGTTCATTTGACATTGGAAGAGAATGGGAGAACATGTTAGATGCAGCAGATGATAGGACGCTTGTGAGGTTGGAAATGTTCTACCGGGACATGATTGCTGGTGTTAAGGATAAACTAATGAAGAGAAGGATCAAAGAAATTGTAAAGGAGTGCCTCCAATCTTCAGAGATGAAACATTAG 1716 0.458 MEDAGKFPNSGNLSRKIVAAAAGESHTLVLAGDGSVYSWGRGMFGRLGHGSEKDELSPVQVKFQNPNGGGDTPKIVAIAAGSYHSLALADDGSVWCWGYNICILNVLLSHLREFSYRYCLFLLLEPDSSIGVSETEGKSSIKISAVKAGGMMSLAIDNHGVLWVWGNCPQQSIEGSVSLVSSFSPTPVLDFHGRSVVKVACGNEHVVALVGAGESYEGEDLVCYSWGCNSHGQLGLGDRENRLHPEVVKTFDEESPWTIYDVACGAYHTALLTRKKNSTDKSESKCWTFGLGENGQLGHGTTQSSLFPTPVQDLPQNMYLIGVGCGLFHTSVVSSEGDVWSWGMEKGLGLCPGATHAGTDSGDALSPLLIPCQPHQPKFPDPVQVACGAAHTIIVGQEGYKVWSWGRGRSGVLGIGNEIDCYAPTMVMWPPMTDDFKEEESRSSEEQDKTKEKEKEKEASAETDEKLSSALNEVKLLQTKLSTMERYASILHGCIFRKPFDEQDIPASLRDSGSFDIGREWENMLDAADDRTLVRLEMFYRDMIAGVKDKLMKRRIKEIVKECLQSSEMKH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1193 571 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 221 275 IPR000408 -
Aev08g1193 571 MobiDBLite consensus disorder prediction 435 464 - -
Aev08g1193 571 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 262 272 IPR000408 -
Aev08g1193 571 Gene3D - 6 110 IPR009091 -
Aev08g1193 571 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 337 398 IPR000408 -
Aev08g1193 571 SUPERFAMILY RCC1/BLIP-II 137 433 IPR009091 -
Aev08g1193 571 PRINTS Chromosome condensation regulator RCC1 signature 199 215 IPR000408 -
Aev08g1193 571 PRINTS Chromosome condensation regulator RCC1 signature 395 416 IPR000408 -
Aev08g1193 571 PRINTS Chromosome condensation regulator RCC1 signature 75 88 IPR000408 -
Aev08g1193 571 PRINTS Chromosome condensation regulator RCC1 signature 35 51 IPR000408 -
Aev08g1193 571 PRINTS Chromosome condensation regulator RCC1 signature 326 344 IPR000408 -
Aev08g1193 571 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 34 91 IPR000408 -
Aev08g1193 571 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 2 570 - -
Aev08g1193 571 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 160 212 IPR000408 -
Aev08g1193 571 Pfam Regulator of chromosome condensation (RCC1) repeat 286 332 IPR000408 -
Aev08g1193 571 Pfam Regulator of chromosome condensation (RCC1) repeat 33 88 IPR000408 -
Aev08g1193 571 Pfam Regulator of chromosome condensation (RCC1) repeat 336 394 IPR000408 -
Aev08g1193 571 Pfam Regulator of chromosome condensation (RCC1) repeat 224 272 IPR000408 -
Aev08g1193 571 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 78 88 IPR000408 -
Aev08g1193 571 SUPERFAMILY RCC1/BLIP-II 15 102 IPR009091 -
Aev08g1193 571 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 284 336 IPR000408 -
Aev08g1193 571 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 20 30 IPR000408 -
Aev08g1193 571 MobiDBLite consensus disorder prediction 435 466 - -
Aev08g1193 571 Gene3D - 125 465 IPR009091 -
Aev08g1193 571 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HERC2-LIKE PROTEIN 2 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1193 Aev-Chr8 7465551 7468204 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1193 - - gmx:100815199 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1193 08 7465551 7468204 Aev08g1193 08 7465551 7468204 ECH