Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1178 ATGGTTTGGTTCAATAGGCTTAGCCTCGTACCACCGCCTACAACGTTGCAGAGAGTGAGGAAGTTTTTGTTTGCAGTGATGTCGAGCACATTGAAGGAGAACGGTGCTGAAGTTTCTTCAGTCACTGAGGATTATATGAATGGTGGTGGTGTCAGAGATTTGTATGGTGAAGATTGTGCCACGGAGGACCAGCTTATCACCCCATGGAGTTTCTCAGTTTCAAGTGGCTGCACTTTGCTGCGAGATCCACGATACAACAAAGGGCTTGCCTTCACTGAGAAAGAAAGAGATGCTCATTACTTGCGTGGTCTTTTACCCCCTGCTGTGTTCACTCAGGATCTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAGAGGCTGTTCTACAAGCTTCTGATCGACAATGTGGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCCTGCCAGAAATATGGAAGCATCTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTGCTGAAAAACTGGCCAGAGAAGAGCATCCAAGTTATTGTTGTGACCGATGGTGAACGTATATTGGGACTTGGAGATCTTGGTTGCCAGGGAATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACTGCACTTGGAGGCGTTCGCCCTTCATCCTGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTCTACATTGGACTTAGACAAAAGAGGGCAACTGGGCAGGAATATGCAGAACTTCTAGATGAGTTTATGCGTGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTTATACAGTTTGAAGATTTCGCAAATCACAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGACTTCTTGCTTCCCTGAAATTAGTTGGGGGATCCTTAGCTGATCATACCTTCTTATTCTTGGGTGCTGGAGAGGCTGGAACTGGCATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACAAAAGCTCCAGTTGAAGAGACTCGCAAGAAGATTTGGCTGGTGGACTCAAAGGGACTTATTGTTAGCTCTCGTCTGGGATCACTTCAGCACTTCAAAAAGCCATGGGCGCATGAGCATGAACCCGTAAAGGAGCTTCTAGATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATCGGATCGTCTGGAGTAGGGAAGACATTTACCAAGGAGGTGGTTGAAGCCATGGCATCCTTGAACGAGAAACCCCTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACTGCTGAAGAAGCTTACACATGGAGCAAGGGTCGAGCAATCTTCGCTAGTGGCAGTCCATTTGATCCTGTTGAATACCAAGGAAAAGTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCCGGTTTCGGCTTGGGTTTGATCATCTCTGGTGCAATCCGTGTCCGCGACGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGATTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCTCACATTGCTGCTAACGTGGCGGCTAAGGCATATGAACTTGGTCTGGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCCGAAAGTTGCATGTACAGCCCAGGCTACAGAAGCTACCGTTGA 1848 0.4616 MVWFNRLSLVPPPTTLQRVRKFLFAVMSSTLKENGAEVSSVTEDYMNGGGVRDLYGEDCATEDQLITPWSFSVSSGCTLLRDPRYNKGLAFTEKERDAHYLRGLLPPAVFTQDLQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGQEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGSLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLGSLQHFKKPWAHEHEPVKELLDAVKAIKPTVLIGSSGVGKTFTKEVVEAMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYQGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKAYELGLASHLPRPKDLVKYAESCMYSPGYRSYR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1178 615 SMART malic_2 140 321 IPR012301 GO:0004471
Aev08g1178 615 Pfam Malic enzyme, NAD binding domain 331 583 IPR012302 GO:0051287
Aev08g1178 615 ProSitePatterns Malic enzymes signature. 327 343 IPR015884 GO:0004471
Aev08g1178 615 Gene3D - 74 328 IPR037062 GO:0004471
Aev08g1178 615 PANTHER MALIC ENZYME 29 615 - -
Aev08g1178 615 PANTHER MALIC ENZYME-RELATED 29 615 - -
Aev08g1178 615 CDD NAD_bind_1_malic_enz 331 609 - -
Aev08g1178 615 Pfam Malic enzyme, N-terminal domain 140 320 IPR012301 GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 206 235 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 146 170 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 358 374 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 302 320 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 461 477 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 327 343 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 PRINTS Malic enzyme signature 242 264 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 Gene3D - 329 615 - -
Aev08g1178 615 SMART Malic_M_2 331 584 IPR012302 GO:0051287
Aev08g1178 615 PIRSF ME 28 615 IPR001891 GO:0004470|GO:0004471
Aev08g1178 615 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 331 614 IPR036291 -
Aev08g1178 615 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 53 330 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1178 Aev-Chr8 7371678 7376126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1178 K00029 - gmx:100801564 1073.54