Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1176 ATGGGTGGTACTGTTGTGTCTCAGTTCCTGGCTCTACAGTCATGTTCCTCTCCACGCTTCCTCGCTCCTTCACTCTCGTGTGCTGCCTCAACCCTCCTCCATTCTCGCCTCTCACGCCCTTCCATCCGCGCCTGCACTGCCTCCTCCACCGCCGCACCTGCAACTTCCTCAGGCACACCCCCTCCTCCTACCCCTCTAAAGAAACGGGTAGTGTCGGGTGTTCAGCCCACTGGGTCAATTCACCTTGGAAACTATTTTGGCGCCATCAAGAATTGGGTTGCACTTCAGAATACGTATGATACGCTTTATTTCATTGTGGACCTCCACGCGATTACATTACCTTATGATGTGCAAGAGTTATCTAAGGCGACAAGGTCAACTGCAGCTATTTATCTGGCATGTGGAGTGGATCCTTCAAAGGCTTCTGTTTTTGTACAGTCTCATGTTCGAGCGCATGTAGAGTTGATGTGGTTGCTAAGTTCCGCAACACCAATTGGTTGGTTGAATAAAATGATTCAGTTCAAAGAGAAATCTCGCAAGGCGGGTGACGAGGAAGTTGGGGTTGCCCTTTTGACATATCCTGTTCTCATGGCTTCTGATATACTTCTTTATCAGTCTGATTTTGTCCCAGTTGGTGAAGACCAAAAGCAGCATTTGGAGTTGACCCGTGACTTAGCTGAAAGAGTTAACAATTTATTTGGAGGGAGAAAGTGGAAGAAATTAGGCGGCCGAGGTGGTACTATATTTAAGGTTCCTGAGCCTCTTATACCTCCAGCTGGAGCACGAATTATGTCCCTAACAGATGGCCTTTCCAAGATGTCAAAATCTGCACCTTCTGATCAATCTAGAATCAATATTCTTGATCCTAAAGATCTTATAGCAAACAAGATCAAACGTTGCAAAACTGATTCATTCCCAGGCTTGGAATTTGACAATCCTGAGAGGCCTGAATGCAGCAATCTTCTTTCCATATACCAGCTCATTTCAGGAAAGACGAAAGAGGAAGTTGTGCAGGAATGCCAAAACATGAACTGGGGCACATTCAAACCTCTTTTAACGGATGCCTTGATTGATCACTTGCATCCCATTCAGGTTTCTCCTTCTATAGTTTACCTTTTCTTTGCTAGTATTTCTAGCACATTTGATATGTGTAGTTGCTCTCGGTTACCGCTTTATACTTTTCCGAGCACGGCGTCTACATCATCACTGTATTGTTTGCAGGTTCGCTACGAGGAAATCATGTCTGATTCAGGTTATCTGGATGAAGTTTTGGCTAAAGGTGCTAGAAATGCATCAGAAATAGCAGATGCTACACTTCATAATGTTTATCAAGCAATGGGATTTTTGAGGAGACGGTGA 1359 0.4489 MGGTVVSQFLALQSCSSPRFLAPSLSCAASTLLHSRLSRPSIRACTASSTAAPATSSGTPPPPTPLKKRVVSGVQPTGSIHLGNYFGAIKNWVALQNTYDTLYFIVDLHAITLPYDVQELSKATRSTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSRKAGDEEVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRDLAERVNNLFGGRKWKKLGGRGGTIFKVPEPLIPPAGARIMSLTDGLSKMSKSAPSDQSRINILDPKDLIANKIKRCKTDSFPGLEFDNPERPECSNLLSIYQLISGKTKEEVVQECQNMNWGTFKPLLTDALIDHLHPIQVSPSIVYLFFASISSTFDMCSCSRLPLYTFPSTASTSSLYCLQVRYEEIMSDSGYLDEVLAKGARNASEIADATLHNVYQAMGFLRRR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1176 452 MobiDBLite consensus disorder prediction 48 69 - -
Aev08g1176 452 Gene3D HUPs 70 264 IPR014729 -
Aev08g1176 452 PANTHER BNAA04G15180D PROTEIN 65 366 - -
Aev08g1176 452 PANTHER TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL 397 448 - -
Aev08g1176 452 PANTHER BNAA04G15180D PROTEIN 397 448 - -
Aev08g1176 452 PANTHER TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL 65 366 - -
Aev08g1176 452 CDD TrpRS_core 69 357 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 Pfam tRNA synthetases class I (W and Y) 69 360 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aev08g1176 452 PRINTS Tryptophanyl-tRNA synthetase signature 130 149 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 PRINTS Tryptophanyl-tRNA synthetase signature 272 282 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 PRINTS Tryptophanyl-tRNA synthetase signature 80 96 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 PRINTS Tryptophanyl-tRNA synthetase signature 207 228 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 SUPERFAMILY Nucleotidylyl transferase 68 364 - -
Aev08g1176 452 Gene3D - 265 364 - -
Aev08g1176 452 TIGRFAM trpS: tryptophan--tRNA ligase 67 365 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Aev08g1176 452 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 76 85 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aev08g1176 452 Hamap Tryptophan--tRNA ligase [trpS]. 67 449 IPR024109 GO:0004830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1176 K01867 - gmx:100780447 658.292