Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1171 ATGGTGGTTTCCGATACTCCCGTCGGTGGCTCTACGCCGCCGCCGACGCCGCCGCAACCGGAGCAAACCACCAAGTTTGGGATCACGAAGCCTATCTCTCTCGCTGGTCCCACCGACACCGATATCAATCGCAACACCGAATTGGAGAAGTTCCTGCTTGATTCGGGGCTTTACGAGAGCAATGAAGAAGCTGCCACTAGACAAGAGGTTCTTCGGCGCCTTGATCAGATTGTGAAGAGCTGGGTGAAACAGTTGACACGCCAACGAGGGTACACAGATCAGATGGTTGAGGATGCCAATGCTGTCATTTTCACTTTTGGCTCGTATCGCCTAGGGGTACATGGACCTGGAGCTGACATAGACACTTTGTGTGTTGGTCCTTCTTACGTGAACCGAGAGGAAGACTTTTTTATCATTTTGCATAACATCTTGTCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTCCAGGGGATATCTATAGATTTGCTTTATGCAAGTATATCCCTTTTGGTTGTCCCAGAAGAACTGGATATCTCAGATGGTTCTGTGCTGTATGATGTTGATGAACCAACTGTTCGAAGTCTTAATGGCTGCCGAGTGGCAGATCAAATTCTTAAACTTGTTCCGAATGTTGAGCACTTCCGAACTACACTGAGATGTTTAAAGTTCTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTTACGGGATTCCTTGGTGGTGTAAATTGGGCTCTTTTAGTTGCTCGTATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGCTGGTTTCTCGATTCTTCAGGGTATATACACAGTGGCGGTGGCCTAACCCTGTGATGTTATGCTCTATAGAAGAGAATGAACTGGGTTTCCCTATATGGGATCCTCGTAGAAACCCCCGGGACAGATTTCACATTATGCCAATAATTACTCCTGCATACCCTTGCATGAATTCCAGTTACAATGTATCGGCTAGCACTCTTCGTGTTATGATGGAACAGTTTCGTTATGGCAACAAGATTTGTGATGAAATTGAGCTCAACAAAGCCCAGTGGAGTGCACTTTTTCAGCCATATATCTTTTTTGAGGCATACAAAAACTATTTACAAGTGGATATACTTGCATCAGATGCTGATGATTTACTAGCATGGAAGGGTTGGGTAGAATCTCGATTGAGGCAGCTTACCCTTAAGATAGAGCGGGATACAAATGGGATGTTGCAGTGTCATCCTTATCCACATGAGTATGCAGACACATCCAAGCCTTGTGCACATTCTGCATTTTTTATGGGCTTACAAAGAAAAGAGGGAGTAAAAGGTCAAGAGGGACAACAATTTGATATACGTGGAACGGTTGATGAATTCAGGCAAGAAATAAATATGTATATGTACTGGAAGCCGGGGATGGAAATCTATGTTTCTCATGTTCGTCGAAAGCAGCTCCCTGCATTTGTATTTCCAGATGGTTACAAACGCAATCGATTGTCGAGGCATACGAGCCATCCATCTGAAAAAATGGGTGAGGATGCCACAAAGGGCTACTCTGGATCTTCTGAAAGAAGCATCAAGAGGAAAAATGACCCTGACATGGTGGATATGATGCCAGGCAAACCAGAGAAGCGGGCCTCTATTAGCCCACAGAGGTTGGAGTGTGTTTCTCCTGAAAATTTTCCTAGTAAATCAGGCGGTGCATCTCAAATGAGTATTGATTGTATTGAAGGGGTTAGGCTAGATGGTTCAGTGACCAATGATGCTGACAGAAAATCCGAAATTAAGTCATCTGATGGTCTCCTAGGAGGTGGAATAAGTACTGAAGGACTTGACATGCAGATTTGTGGGACAGGTGTTGCTGACTCTACACACGAACGGCAGAAATCAAGATGTACAGAACCAGAAGTTCAGAATGAGAATGGAGTCAATAAGGACGAAGCTCGGGATCTGGATCTAGATTGCTTAGAAAGCCCAGAAATTGCACCTTGCAAAAGCTTGTCAAATTGTAAAGATGGTGCTATTGATATGGATCAACGACTAGACACAGCTTGTAACTTCACATCAAGGGCTGAATGCTCAGATTTTGTACCAAGTGCAACCACTCAGAACCTCAATTGCGAGAGAGATGTCAGACTTGGAAGTGTTGTATAA 2181 0.4425 MVVSDTPVGGSTPPPTPPQPEQTTKFGITKPISLAGPTDTDINRNTELEKFLLDSGLYESNEEAATRQEVLRRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHNILSEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEELDISDGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDILASDADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCAHSAFFMGLQRKEGVKGQEGQQFDIRGTVDEFRQEINMYMYWKPGMEIYVSHVRRKQLPAFVFPDGYKRNRLSRHTSHPSEKMGEDATKGYSGSSERSIKRKNDPDMVDMMPGKPEKRASISPQRLECVSPENFPSKSGGASQMSIDCIEGVRLDGSVTNDADRKSEIKSSDGLLGGGISTEGLDMQICGTGVADSTHERQKSRCTEPEVQNENGVNKDEARDLDLDCLESPEIAPCKSLSNCKDGAIDMDQRLDTACNFTSRAECSDFVPSATTQNLNCERDVRLGSVV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1171 726 Pfam Poly(A) polymerase predicted RNA binding domain 436 506 IPR007010 GO:0003723|GO:0043631
Aev08g1171 726 Pfam Poly(A) polymerase predicted RNA binding domain 374 432 IPR007010 GO:0003723|GO:0043631
Aev08g1171 726 MobiDBLite consensus disorder prediction 1 25 - -
Aev08g1171 726 Gene3D Beta Polymerase, domain 2 59 215 IPR043519 -
Aev08g1171 726 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 374 499 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aev08g1171 726 PANTHER POLY A POLYMERASE 22 623 - -
Aev08g1171 726 SUPERFAMILY Nucleotidyltransferase 24 220 IPR043519 -
Aev08g1171 726 MobiDBLite consensus disorder prediction 633 652 - -
Aev08g1171 726 SUPERFAMILY PAP/OAS1 substrate-binding domain 222 371 - -
Aev08g1171 726 Gene3D - 27 369 - -
Aev08g1171 726 MobiDBLite consensus disorder prediction 506 560 - -
Aev08g1171 726 Pfam Poly(A) polymerase central domain 27 370 IPR007012 GO:0004652|GO:0043631
Aev08g1171 726 MobiDBLite consensus disorder prediction 506 521 - -
Aev08g1171 726 MobiDBLite consensus disorder prediction 531 549 - -
Aev08g1171 726 Gene3D Poly(A) polymerase predicted RNA binding domain 374 489 - -
Aev08g1171 726 Pfam Nucleotidyltransferase domain 100 176 IPR002934 GO:0016779
Aev08g1171 726 PANTHER NUCLEAR POLY(A) POLYMERASE 4 22 623 - -
Aev08g1171 726 MobiDBLite consensus disorder prediction 629 652 - -
Aev08g1171 726 CDD NT_PAP_TUTase 67 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1171 Aev-Chr8 7328470 7333534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1171 K14376 - gmx:100819294 1189.87