Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1154 ATGACATCCTCCAAGAGACCAAATGCAGAGTCAAATGGGAAAGGAAAACGCCAGAAGTCGGGGGGTGGGTTTACAGCTTTGGATGTCGCTCCTGGGAGTGTTGTTCTTCGTTTACTCTGTCCGGTTTCTAGAATTGGCAGTGTTATTGGTAAAGGTGGCGCCATTGTATCGCAAATCCGACAGGAAACTGGCGTGAAGCTTAAAATTGAGGATGGTATTCCTGGATGTGACGAGAGGGTTATAACTATTCTAGGTTCTGATAATAAAGAGACTGAGGAAGAAACTGAGCAGGGAAAGGAGGTTAATAATGGCCAGGCTGATGTCAAGGAGGTGGATAATGAAACAAAAGATCACATTGAAAATAATGAAAATAAAGATTCTGTCCCTGTCGAAGATTCAAAAAATGAAAAGGGACATCCGTCTATCCGGAAGGCTTTATCACTAGTTTTTGAGAGGATGGCTGAAGGAGCTGAGGAGACAACAGAGGGTGATAAAGAAAGTAGTAAACCTTCATCCTTTGCTTTTAGGCTACTTGTCCTTTCTAATCAAGTTGGATGCCTTCTGGGAAAGGGTGGTAGCGTAATCAAACAAATGTCAGCTGATAGTGGTGCACAGATTCGTATACTTCCGAGGGATAAACTTCCATTGTGTGCTACAGCTTCTGATGAGCTTGTTCAGATCACCGGGGGAGTTAATGTTGTCAGGAAGGCTCTTCAATCTGTTACTCAACAGCTTTTGGAAAATCCACTGCGGGATCATGAATCTCTTTCTGCCAATGCTACAGAGCCATCGTCTCATTCACTTGGTCAATTCCCACCGCACAGCCGTTCTATTACTGCTGGTTCCCATGATGTTTCTGTTTTCCATCCTACTCCTCCTCTGATTCCTAAATTTCACGAAGGTGGCATTCATGGACGCATGATGCCTTCACAGGAGATGCTTACTTTCCGGTTATTGTGTCATACAGAAAGGGTAGGAAATATAATTGGTAAAGGTGGAGCCATCGTAAAAACTGTGCAGCAAGAGACTGCTAGTGAAATCAAGGTTATGGATAGCGTTCCGGATTCAGAGGACTGCGTTATTGTTATATCAGGTCCAGCGCACCCAGACGATAGAGTATCTCCTGTGCAAGAGGCTGTATTTCGTGTGCAGGCCAGAATAGGCAGGGGTATACCTGATGCCAAAGAGCATAGTATGGTATCCAGGCTTCTTGTTAATACCAGTCAAATAGGTTGTCTACTTGGCAAGGGTGGTTCCATCATTGCTGAAATGAGGAAGTTATCAGGGGCCCATATCCGTATATTAGGAAAGGACAAGGTTCCAAAGTGCGCTGCAGAAGATGAAGAAGTGATTCAGATAAGTGGAGAATTAGAGACAGTGCAAAATGCACTTTTGCAAGTAACCACGAGGTTAAGACACCATTTCTTCCGTGATGCATATCCATCTGCAAATTATCCTTCCAACTCTGAATATCTAGACCAAGTTCCTCCATTCCCACCTTACTTTGGAAGGCGGGGACTTTCACCTCCAGGGATGTATTCTAACCTAGGTCCTCCACCTCCACATGGGGGTTTTCCCCTTGATGATCATCCTCCTTTCATGAGTATACATAGACTGCGTTTTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTCAGGGGCTACGAGAAGGTGGTGGACCCATGGGATTGCCAGACTTTCCAGGAGGCCCTCCTAGAAGAATTCCGGGATTTGCAGGAGGGGGCCAACCAATTATCACAAGTACCACTGTTGAAGTAGTTGTTCCTCGAAAGCTTGTGCCTGTAATTTACGGGGAAGATGGTGAATGCCTAAAACAAATACTTCAGATCTCTGATGCAAAGATTAATATTACTGATCCAAAGCCGGGAGCTGTCGAAACAAAAATTATAATATCTGGAACCCCAGAACAAACTCATGCTGCCCAGAGTCTTATTCAGGCATTTGTTTTGAGCGAGACAGAGTCTGGTTGA 1995 0.4476 MTSSKRPNAESNGKGKRQKSGGGFTALDVAPGSVVLRLLCPVSRIGSVIGKGGAIVSQIRQETGVKLKIEDGIPGCDERVITILGSDNKETEEETEQGKEVNNGQADVKEVDNETKDHIENNENKDSVPVEDSKNEKGHPSIRKALSLVFERMAEGAEETTEGDKESSKPSSFAFRLLVLSNQVGCLLGKGGSVIKQMSADSGAQIRILPRDKLPLCATASDELVQITGGVNVVRKALQSVTQQLLENPLRDHESLSANATEPSSHSLGQFPPHSRSITAGSHDVSVFHPTPPLIPKFHEGGIHGRMMPSQEMLTFRLLCHTERVGNIIGKGGAIVKTVQQETASEIKVMDSVPDSEDCVIVISGPAHPDDRVSPVQEAVFRVQARIGRGIPDAKEHSMVSRLLVNTSQIGCLLGKGGSIIAEMRKLSGAHIRILGKDKVPKCAAEDEEVIQISGELETVQNALLQVTTRLRHHFFRDAYPSANYPSNSEYLDQVPPFPPYFGRRGLSPPGMYSNLGPPPPHGGFPLDDHPPFMSIHRLRFPPHISERKPWGPQGLREGGGPMGLPDFPGGPPRRIPGFAGGGQPIITSTTVEVVVPRKLVPVIYGEDGECLKQILQISDAKINITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVLSETESG* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1154 664 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 589 659 IPR036612 GO:0003723
Aev08g1154 664 ProSiteProfiles Type-1 KH domain profile. 398 467 - -
Aev08g1154 664 MobiDBLite consensus disorder prediction 254 285 - -
Aev08g1154 664 Gene3D K Homology domain, type 1 311 390 IPR036612 GO:0003723
Aev08g1154 664 Gene3D K Homology domain, type 1 31 93 IPR036612 GO:0003723
Aev08g1154 664 CDD PCBP_like_KH 35 86 - -
Aev08g1154 664 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 394 481 IPR036612 GO:0003723
Aev08g1154 664 CDD PCBP_like_KH 402 468 - -
Aev08g1154 664 ProSiteProfiles Type-1 KH domain profile. 313 380 - -
Aev08g1154 664 MobiDBLite consensus disorder prediction 86 142 - -
Aev08g1154 664 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 87 IPR036612 GO:0003723
Aev08g1154 664 Pfam KH domain 36 88 IPR004088 GO:0003723
Aev08g1154 664 Pfam KH domain 176 240 IPR004088 GO:0003723
Aev08g1154 664 Pfam KH domain 315 367 IPR004088 GO:0003723
Aev08g1154 664 Pfam KH domain 402 467 IPR004088 GO:0003723
Aev08g1154 664 Pfam KH domain 591 654 IPR004088 GO:0003723
Aev08g1154 664 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 309 368 IPR036612 GO:0003723
Aev08g1154 664 MobiDBLite consensus disorder prediction 1 25 - -
Aev08g1154 664 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 2 526 - -
Aev08g1154 664 ProSiteProfiles Type-1 KH domain profile. 33 102 - -
Aev08g1154 664 ProSiteProfiles Type-1 KH domain profile. 589 653 - -
Aev08g1154 664 CDD PCBP_like_KH 315 384 - -
Aev08g1154 664 Gene3D K Homology domain, type 1 588 660 IPR036612 GO:0003723
Aev08g1154 664 MobiDBLite consensus disorder prediction 86 141 - -
Aev08g1154 664 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 2 526 - -
Aev08g1154 664 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 164 249 IPR036612 GO:0003723
Aev08g1154 664 CDD PCBP_like_KH 175 238 - -
Aev08g1154 664 MobiDBLite consensus disorder prediction 254 284 - -
Aev08g1154 664 Gene3D - 97 249 - -
Aev08g1154 664 SMART kh_6 312 388 IPR004087 GO:0003676
Aev08g1154 664 SMART kh_6 588 658 IPR004087 GO:0003676
Aev08g1154 664 SMART kh_6 171 246 IPR004087 GO:0003676
Aev08g1154 664 SMART kh_6 32 102 IPR004087 GO:0003676
Aev08g1154 664 SMART kh_6 397 472 IPR004087 GO:0003676
Aev08g1154 664 Gene3D K Homology domain, type 1 396 475 IPR036612 GO:0003723
Aev08g1154 664 CDD KH-I 591 654 - -
Aev08g1154 664 ProSiteProfiles Type-1 KH domain profile. 172 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1154 Aev-Chr8 7202272 7206332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1154 K21444 - gmx:100785136 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1154 08 7202272 7206332 Aev08g1154 08 7202272 7206332 ECH