Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1143 ATGGCTGCTTCCACAAGAGACCAAGCCCTCTCTCTCTTCGCCGCCGCCAACAACCACGGCGACATCTCCGTCAAGCTCTCCTCCCTCGTCCAAGCCAAAGACCTTCTTCTCTCCCTCGACTCATCCACCGCCGCCGACCTCTTCCCTTACTTCCTCGAGCTCCAGTCTTCTCCCGAAAGCCTCGTTCGCAAATTGCTCATTCAGGTAATTGAGGAGATCAGTTTTAAAGCGGTTGAGCATTCTCCTGCACTGGTGTCTGTACTCTTAACATTTTTGCGAGATGCTGATGCAACAGTTGTGAAGCAATCTATTGTTAGTGGCACCAGTATCTTCTGCAGTGTTTTTGAGGAGATGATTTTGCAGTTTCAACGATATGGTAAAGTAGAGAGGTGGTTAGAAGAGATTTGGATGTGGATGCTTAAGTTCAAGGATGCTGTTTTTGGGATTGCTCTAGAGCCTGGTTCTGTTGGAATAAAGGTGCTGGCATTGAAATTCTTGGAAACATTTGTCTTACTTTTTACATCTGACACCAGTGATCCTGAGAAATCATCAACTGAAGGAGTTAGAAATGCTGCTAATATCTCATGGTTGGCGGGTGGTCACCCTGTTCTTGATCCAGTGGTGCTTATGTCAGAGGCGAATAGGACTATTGGCATTTTATTAAACTTATTGCAGTCTGCTGGAAGTCTCCCTGGTTGCTTGACTATTACTGTTGTAAATTGTTTATCAGCTGTTGCAAGGAAAAGGCCACAACATTATGATACTATTCTTTCTGCATTGCTTGATTTTGATCCAAATTTTCAAACAGCGAAAGGGTGTCATGTTGCTAGTGTTCAGTACTCCTTAAGAACTGCTTTTTTAGGGTTTCTAAGGTGCACTTATTCACCAATTCTAGAGTCTAGAGAAAGGTTGATAAGGAGCCTGCGAGCTATGAATGCAGGTGATGCTGCTGATCAGGTCATACGACAAGTTGACAAAATGATTAAAAATGGTGATCGTTCTTCCCGTGATGCTCGAGTTAGCAAGGAGGATCAATCAACAACTCAGCCAGTCTTCTCAGGGGAAGTACCTAGAAAAAGACCTTTTCCTCTAGAGAACGAACTATTGGCCAATGGCCATGAGGCCATCTCTAAGAGGATTCGTTCTGGTCCTGACCCTCACTTCAACTTGCCAGCTCAAATAAATGATTCTGGGCAGGATTTTAACTCTGTTAACGGGGTGTCACCTACTGTCCCTGTACTAGACAGTGAATTAACTCCTGTGGAACAAATGATTGCTTTGATTGGTGCTTTAATTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATACATCCTGATCTGTTGGCCGATATTGTCATAACTAATATGAAGCATTTGCCTAAGACACCCCCACCACTAGCAAGGCTTGGGAATTCACCAGTAGCTCGGCAAGTTGGTCATCAAGTCAGTCAATCGCAAGTTATAGTTGCATCTGCTCCAATAAGTTCTGCCCAATCCTTGGCTGTTACTGGCCAAGCATTATTTCCTTCAACTACAACCACTGCCACTGCCACCAGCTCATCACTATCTGACACCTCTAATATCAATAGCTTGCCGGCTGATTCTAAACGTGATCCACGCAGGGATCCCCGTCGCTTGGATCCACGGCGTATAGCAGTACCGCCTGGTGGAGCAGCTGGCTCTATCACAGATGATACAGGGGAAACAAAGTCAGAGTTTGATGATCCCGTGTCTTCAATTAAGCCTGTTTCATATCCTGCTTACACTGCTGATGACAATACTCCAACAGAGCCATTGATCAAAATAAACAATGATGATATGATCTCTGAAGGTCCCTCAGTTTCCGGATCTGATCGGTTAACTACCAAAATAGAGGTTCCAGAGTGGCCTGGAGATATTCACCAGGTTGCTGAAGCAAATACTACTTTGGATCCCTCAGTCTCTGCCGTTGATGCAAGAGATGAGGATCTGAGTACAACGAAGCCGTTGGAGGATACAGAAGTAAATGGGACTGATTCATCATCTAATTTAGAGTTTGATCAGTTTTCTCATGATGTTCAAGTTGCATCTACATCAGAAGAAACCTGTCTTGAATTACCAGAGCTTCCACCATATGTTGAACTACCCAAGGAGCAGGAAACTAAGGTGAAACTCATGGCTTTTAGGCATATAATTGAGTCCTACAAACATTTGAATGGGACAGATTGTCAACGGTTTTGTATGCCACTCCTTGCTCGACTAGTAGCTCAGATTGATGACGATAATGAGTTTATTTCAATGCTGCAAAAACACATCCTGGAAGACCACTGGCGAAAGGGGAATGAGCTTGTGCTGCATGTTTTATACCATCTGCACTGCCTCACAATATTGGATTCAGCTGGAAACTCTTCATCTTCTGCTGTTTTGTATGAAAAATTTCTCTTGGGAGTGGTCAAATCTCTTTTGGATTCTTTTCCAGCTTCAGACAAATCTTTTAGTAAGCTTCTTGGTGAAGTCCCACTTTTGCCAGAATCTGGCTTGAAGATTTTGAATGATCTCTGCTATTCTGATGTTATTGATAATGATGGAAAAATTATCCGCGACATTGAACGCGTAACTCAAGGCCTTGGTGCCGTATGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGCGTGCTTAGAAATAGCTTTGAAGTGTGCTGTTCACCCACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAATTACATAGCTGAAGATGTTGAGAAATTTGCTACAAAAATGCTTCTGTGTGCAGTCGATCATGAAGTTTCAGATACAGGTGTTTTGCAGTCTGGACCTGCTGAGCAAAGAGCTGAGCCAGAGGGTGCTAGTCAGGAAACAAGTGGTACATCACAGGTTTCAGAGTCCGCTGTTTCTGAACATGACTCTTCTAAATCCACTAAACCAATGGTTCAAAGTGTTCCAGCCATATCATTCTCTGAAGCTCAACGCTTCATTTCTTTATTTTTCGCTTTATGTACAAAGAAACCTAGTCTTCTTCAGATTGTATTTGATGTCTATGGGCGAGCCCCAAGAACTGTGAAACAGGCTTTTCATCGCCACATACCTATTCTTCTAAGGGCATTAGGCCAATCTTATTCTGAATTGCTCCATATTATATCTGATCCACCAGAAGGAAGTGAAAATCTTCTGACACTGGTGCTGCAAATATTGACGCAAGATACAACACCACCTTCTGAACTGATATCTACCGTTAAACGTTTATATGAAACTAAATTTAGGGATGTTTCGATTCTTGTTCCTCTGCTGTCATCACTTTCCAAAAAGGAGGTTTTGCCGATATTCCCTCGGCTTGTTGACCTACCATTGGAAAAGTTCCAAAGGGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTTTTGGTTGCAATCCATGGAATTGTTCCTGAAAAAGATGGGCTTGCACTTAAGAAGATAACAGATGCTTGCTCAGCTTGTTTTGAGCAGCGTACAGTGTTTACACAACAGGTTCTGGCAAAGGCATTGAACCAGATGGTTGATCAAACTCCTCTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCACTGGTTGATTTTGTCATGGAGATTCTCTCAAAACTTGTCACGAAACAGATCTGGCGTATGCCAAAACTTTGGGTTGGTTTTTTGAAATGTGTATACCAGACTCAGCCACGTTCTTTCCATGTATTGTTACAGTTGCCACCTCCACAACTGGAAAGTGCTCTTAACAGGCATGCTAACCTCAGAGGTCCGCTTGCTTCTTATGCCAACCAATCCACTGTAAAATCTTCACTTCCTAGAGCAACTCTAGCAGTTCTCGGCCTTGCAAATGAAACTCATGCGCAGCAACATTTGTCAACATCATTGCACCCGTCTGACACAAGTTCTTCAGTTCAAGGAGCAACTCTGTCATGA 4029 0.4324 MAASTRDQALSLFAAANNHGDISVKLSSLVQAKDLLLSLDSSTAADLFPYFLELQSSPESLVRKLLIQVIEEISFKAVEHSPALVSVLLTFLRDADATVVKQSIVSGTSIFCSVFEEMILQFQRYGKVERWLEEIWMWMLKFKDAVFGIALEPGSVGIKVLALKFLETFVLLFTSDTSDPEKSSTEGVRNAANISWLAGGHPVLDPVVLMSEANRTIGILLNLLQSAGSLPGCLTITVVNCLSAVARKRPQHYDTILSALLDFDPNFQTAKGCHVASVQYSLRTAFLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRSSRDARVSKEDQSTTQPVFSGEVPRKRPFPLENELLANGHEAISKRIRSGPDPHFNLPAQINDSGQDFNSVNGVSPTVPVLDSELTPVEQMIALIGALIAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARLGNSPVARQVGHQVSQSQVIVASAPISSAQSLAVTGQALFPSTTTTATATSSSLSDTSNINSLPADSKRDPRRDPRRLDPRRIAVPPGGAAGSITDDTGETKSEFDDPVSSIKPVSYPAYTADDNTPTEPLIKINNDDMISEGPSVSGSDRLTTKIEVPEWPGDIHQVAEANTTLDPSVSAVDARDEDLSTTKPLEDTEVNGTDSSSNLEFDQFSHDVQVASTSEETCLELPELPPYVELPKEQETKVKLMAFRHIIESYKHLNGTDCQRFCMPLLARLVAQIDDDNEFISMLQKHILEDHWRKGNELVLHVLYHLHCLTILDSAGNSSSSAVLYEKFLLGVVKSLLDSFPASDKSFSKLLGEVPLLPESGLKILNDLCYSDVIDNDGKIIRDIERVTQGLGAVWSLILGRPQNRQACLEIALKCAVHPQDEIRAKAIRLVTNKLFQLNYIAEDVEKFATKMLLCAVDHEVSDTGVLQSGPAEQRAEPEGASQETSGTSQVSESAVSEHDSSKSTKPMVQSVPAISFSEAQRFISLFFALCTKKPSLLQIVFDVYGRAPRTVKQAFHRHIPILLRALGQSYSELLHIISDPPEGSENLLTLVLQILTQDTTPPSELISTVKRLYETKFRDVSILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTKQIWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNRHANLRGPLASYANQSTVKSSLPRATLAVLGLANETHAQQHLSTSLHPSDTSSSVQGATLS* 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1143 1342 Pfam Symplekin tight junction protein C terminal 1104 1282 IPR022075 -
Aev08g1143 1342 PANTHER SYMPLEKIN-RELATED 17 1341 - -
Aev08g1143 1342 PANTHER SYMPLEKIN-RELATED 17 1341 - -
Aev08g1143 1342 Gene3D - 1 344 IPR011989 -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 540 555 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 521 539 - -
Aev08g1143 1342 Pfam Symplekin/PTA1 N-terminal 96 319 IPR032460 -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 963 992 - -
Aev08g1143 1342 SUPERFAMILY ARM repeat 18 1229 IPR016024 -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 652 682 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 1321 1342 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 327 343 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 521 624 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 950 992 - -
Aev08g1143 1342 MobiDBLite consensus disorder prediction 327 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1143 Aev-Chr8 7079571 7095975 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1143 K06100 - gmx:100789876 2059.26