Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1139 ATGTCCGTTGTTTCCTCCACTGTCTCGGCCACCAAGTTGGAGACTTTACTGTTCCAATGCTCTTCATCCTCGTCAACTGCAATCACCCGCTTATCAGTTGTTGGCAAAAACAGAGGGACCTTCATTCAGAGAGGAGTCATTCGCTGCGACGCGTCTGCTCATACCAATGGTAGCACCCAGCTCTCTGCTCTTGACCAGCTGAAAACTTCTGCAGCTGATAGGTATACGAAGGAAAGGAGTAGCATTGTGGTCATAGGTCTCAGTGTGCACACTGCACCTGTAGAAATGCGCGAAAAACTTGCCATTCCAGAAGCAGAATGGCCTAGAGCCATTGCAGAGCTGTGTAGTCTTAATCATATTGAAGAAGCAGCTATTCTCAGCACCTGCAACCGAATGGAGATTTATTTTATTGCTATGTCTCAACATCGAGGTGTCAAAGAAGTCATGGAATGGATGTCAAAGACAAGTTCCATCGCCGTTGCAGAGCTTCGCCAGCACCGGTTTTTACTTTACAACAAAGATGCCACACATCATCTATTGGAAGTATCAGCAGGTCTTGACTCTCTTGTATTGGGAGAAGGTCAAATCCTGGCTCAGGTCAAGCAAGTTGTGAAAGTTGGACAAGGAGTTAATGGCTTTGGGAGAACCATTAGTGGCCTATTCAAACATGCAATTTCTGTTGGGAAGAGGGTCAGAACTGAGACTAATATTGCTGTTGGGGCAGTTTCTGTGAGCTCAGCTGCTGTTGAATTGGCCTTTATGAAGCTACCTGAAGTCTCACATGATCATGCCAGGATGTTGATTATTGATGTAGTCTTCACCTGTACATCATCAGAAACCCCGTTATTCTTGAAACATCATGTTGAGAACCTTCCTCCTGCTAGTCAAGATGTTGGAGGCCATCGCCTTTTCTTCGATATCTCCATTCCACGAAACGTGGAATCATGTGTCTCGAATCTCGAGTCTGTGCAGGTTTATAATGTTGATGACCTTAAAGAGGTCGTGGCTGCTAATAAAGAGGATAGACTAAGAAAAGCGATGGAAGCTCAGGCAATCATTGCAGAAGAATCAAAACAATTTGAAGCTTGGAGGGACTCACTGGAAACTGTCCCTACTATCAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGCTTGCAGAGATTGAGAAATGCTTAGGCAAGATGGGTGATGAGATCTCAAAGAAGGCACTGAGAGCTGTGGATGATCTTAGCCGGGGTATAGTGAATAAGTTGCTTCATGGACCAATGCAACACTTGAGGTATGATGGGAGTGACACCCGAACTTTAAGTGAGACCCTTGAGAACATGCATGCTTTGAACAGAATGTTTGGCCTTGACACTGAAATATCTGCTTTGGAGCAGAAGATTCGAGCAAAGATGGAACAAAATCACAAGTGA 1419 0.4475 MSVVSSTVSATKLETLLFQCSSSSSTAITRLSVVGKNRGTFIQRGVIRCDASAHTNGSTQLSALDQLKTSAADRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAILSTCNRMEIYFIAMSQHRGVKEVMEWMSKTSSIAVAELRQHRFLLYNKDATHHLLEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRTISGLFKHAISVGKRVRTETNIAVGAVSVSSAAVELAFMKLPEVSHDHARMLIIDVVFTCTSSETPLFLKHHVENLPPASQDVGGHRLFFDISIPRNVESCVSNLESVQVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAEIEKCLGKMGDEISKKALRAVDDLSRGIVNKLLHGPMQHLRYDGSDTRTLSETLENMHALNRMFGLDTEISALEQKIRAKMEQNHK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1139 472 PIRSF GluTR 259 468 IPR000343 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 PIRSF GluTR 80 269 IPR000343 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 85 235 IPR015895 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 PANTHER GLUTAMYL-TRNA REDUCTASE 270 472 - -
Aev08g1139 472 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 348 452 IPR015896 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 346 450 IPR036453 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 81 237 IPR036343 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 Coils Coil 456 472 - -
Aev08g1139 472 Hamap Glutamyl-tRNA reductase [hemA]. 81 450 IPR000343 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 270 472 - -
Aev08g1139 472 Gene3D - 80 240 IPR036343 GO:0008883|GO:0033014|GO:0050661
Aev08g1139 472 ProSitePatterns Glutamyl-tRNA reductase signature. 178 201 IPR018214 GO:0008883
Aev08g1139 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 266 342 IPR036291 -
Aev08g1139 472 Pfam Shikimate / quinate 5-dehydrogenase 266 334 IPR006151 -
Aev08g1139 472 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 3 269 - -
Aev08g1139 472 PANTHER GLUTAMYL-TRNA REDUCTASE 3 269 - -
Aev08g1139 472 Gene3D - 269 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1139 Aev-Chr8 7058198 7060519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1139 K02492 - gmx:100782247 688.723