Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1113 ATGGTGCGCGACGTCGTGCTCCAAGTCGTCATGATCCTCACCATGGTCATCGTTTTCCTCTTCATGCACGGCATCCCTCAGAGAATCCTCGCCTGGCTCCGCCTCCCTAGCCAAACCACCGTCCGAGCCAAGCGCCACTTCGTCCGAGGCGCTCAGCTCCTTGCCCAGGCCCGAGCCTCCTCCAGGAACAACCGAGCCAAATCCGATTCGCTAGCCAAAGAAGCCCTAGCCGAAGCGGAGAAAGCGATCGCGCTCGATCCGAAGGACTCAGCGTCGTACCTCCTCAAAGCAATGGTTCTCGATCTGCAAGGGTTCCGCACCTCCGCGCTCGACGCGATCGACGCGGCGCTGTCGCCGCTGGCGGCGAAGTCGCTCGCCGTCGAGGAGAGGGGAGACGCGCTGCTGAAGAGGGCGGAGCTGAAGATTGCGGTGAACAAGAGCAGCGGCAGCGGAGGAGGAGAAGGACGAGTTGACTCGGCGATTGTGGATTTGAAGGAATCGGTGGAGCTGAGTCCGAAGAACGTGAGAGGATGGTGTTTGTTGGGGGAATGTTATGAGGAGAAGGAGATGAAAGAGGAAGCGAAGAATGCTTATAAAGAAGCTCTTGAGTTGGAGCCTGAGCTCAGTGTGGCTCAGGAAGCGCTCAAGAAGTTGGGATCGGAATAG 666 0.5871 MVRDVVLQVVMILTMVIVFLFMHGIPQRILAWLRLPSQTTVRAKRHFVRGAQLLAQARASSRNNRAKSDSLAKEALAEAEKAIALDPKDSASYLLKAMVLDLQGFRTSALDAIDAALSPLAAKSLAVEERGDALLKRAELKIAVNKSSGSGGGEGRVDSAIVDLKESVELSPKNVRGWCLLGECYEEKEMKEEAKNAYKEALELEPELSVAQEALKKLGSE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1113 221 Gene3D Tetratricopeptide repeat domain 54 148 IPR011990 GO:0005515
Aev08g1113 221 SUPERFAMILY TPR-like 73 214 IPR011990 GO:0005515
Aev08g1113 221 SMART tpr_5 175 208 IPR019734 GO:0005515
Aev08g1113 221 PANTHER - 4 218 - -
Aev08g1113 221 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 4 218 - -
Aev08g1113 221 Gene3D Tetratricopeptide repeat domain 152 221 IPR011990 GO:0005515
Aev08g1113 221 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Aev08g1113 221 Pfam Tetratricopeptide repeat 176 207 IPR001440 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1113 Aev-Chr8 6790915 6791580 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1113 - - gmx:100783725 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1113 08 6790915 6791580 Aev08g1113 08 6790915 6791580 ECH