Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1112 ATGGCCACTAATGAAGATTTTCAAGGTGTATCAAATTGTTATGTGTTCAAGAGCAGATTGCAGGAGTATGCACAGAAGGTGGGGCTTCCCACACCTGTGTATGAAACCATCAAGGAAGGGCCTTCACATGAACCTTCTTTCAGGTCCACTGTTATTGTGGATGATTTCAGGTATGACTCTTTGCCTGGGTTCTTTAACCGGAAAGCGGCGGAGCAGTCAGCTGCGGAGGTTGCCTTGTTGGAGCTTGCCAAGTCTGATGAAGTTAAATCCATAGCTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAGGAGTATGCACAGAAGATGAATTATGCGATGCCTGTGTATCAGTGCAAGAAGGATGAAACACCAAGTCGAGCACCTGCATTTACATGTACCGTTGACATTGGGGGAATTCTCTATATTGGGGGAGCTGCAAAAACGAAGAAAGAAGCAGAGATAAAAGCAGCCAGAACTGCTTTATTAGCTATCCAGTCGAAAATGAAACCTGGACCATTCACATTAGAAGCCAATAAGGTAGGCCACAATGTTGAAAATGTGGGCACCGGAGCAAATATCATTCCTGCGGTAGAATCACATGCAAACGTCAGTGATGAGCCTGGCTCCTCAGAAGCCATGAAGAATTCGGCTAATGGAAAATCGGTTAATTGTTGTGAGAAAGAATCATTAGATGGGGAGGTTTCTCATCTTCCGAATGGACATGGTTCTTTTGAAAATGGTAACTCAACAGAATCGCATTCCAGAGAGGACAACATTGGAACCGTTGCTTCAGAAGTATCTTGTGTGTCTAATGTATAG 828 0.4372 MATNEDFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPSFRSTVIVDDFRYDSLPGFFNRKAAEQSAAEVALLELAKSDEVKSIAQPVHETGLCKNLLQEYAQKMNYAMPVYQCKKDETPSRAPAFTCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSKMKPGPFTLEANKVGHNVENVGTGANIIPAVESHANVSDEPGSSEAMKNSANGKSVNCCEKESLDGEVSHLPNGHGSFENGNSTESHSREDNIGTVASEVSCVSNV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1112 275 Pfam Double-stranded RNA binding motif 102 165 IPR014720 -
Aev08g1112 275 Pfam Double-stranded RNA binding motif 17 82 IPR014720 -
Aev08g1112 275 SUPERFAMILY dsRNA-binding domain-like 13 82 - -
Aev08g1112 275 PANTHER RIBONUCLEASE III 1 171 IPR011907 GO:0003723|GO:0004525|GO:0006364
Aev08g1112 275 SUPERFAMILY dsRNA-binding domain-like 102 171 - -
Aev08g1112 275 Gene3D - 97 169 - -
Aev08g1112 275 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Aev08g1112 275 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 171 IPR031147 GO:0003725
Aev08g1112 275 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Aev08g1112 275 CDD DSRM_AtDRB-like_rpt2 99 168 IPR044451 GO:0003725
Aev08g1112 275 Gene3D - 16 96 - -
Aev08g1112 275 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 100 169 IPR014720 -
Aev08g1112 275 SMART DRBM_3 16 83 IPR014720 -
Aev08g1112 275 SMART DRBM_3 101 168 IPR014720 -
Aev08g1112 275 MobiDBLite consensus disorder prediction 235 275 - -
Aev08g1112 275 MobiDBLite consensus disorder prediction 244 275 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1112 - - gmx:100782651 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1112 08 6785073 6787520 Aev08g1112 08 6785073 6787520 ECH