LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g1089	ATGTTCAAGTTGAACCAACCAACCAATATCGCCGCCAGCATAAGCACACAGAATCAGCAAAAAGACAAAACCACCCTCCACGCTGTCACAACAACAACTACTGAGACCAAACTAAAAACAAAATCTCCACTTCCTCAGAATAATGCTTTGTTTCCCTCACTCATTCGAGGAAAGAAAGAAAATATCAAATGCCACAACAACCTTAACCTCTTTCCTCTTCCTCGTGAAATTCATTCGCGATTAACCTTAATGGCATCGATCTCCAGCATTTGTTCCTCTTCCCACACTCTCAAGTTCCGAAGCCACTCCTTACCGTTGACCAATCCGCTCCGAAAGGGATCCGAACTCGTCGCGTTCCCGACCCGCCCCAGACTCGCCTCGGATCGGACCCTCTCCCTCGTATCGACTCACTCCGTCGCGCGGGAGGTCCCGGCGGAGCTATCGACGGTCAACGACGGAGTTGCAGCGAAGAAGGGAGGGTTGGAGAAAGATCCACGCGCGCTATGGAGGCGTTACGTGGAGTGGCTGTACCAGCACAAGGAGCTGGGGCTGTACTTGGATGTGAGTCGGGTCGGGTTCACGGACGAGTTCGTGGAGGAGATGGAGCCCCGATTCCAGGCTGCGTTTAAGGCTATGGTGGAATTGGAGAAAGGTGCGATTGCGAATCCAGATGAAGGGCGCATGGTTGGGCATTACTGGCTCAGAGACGCCAATCGCGCACCGAATACGTTCCTCAGGACTCAGATTGAGAACACTCTTGAAGCTATCTGCAATTTTGCTGATGATGTCCTCACTGGTAAGATTAAGCCTCCGTCGTCGCCGGAGGGTCGTTTTACTCAGATACTGTCTGTGGGCATTGGTGGTTCGGCTCTTGGACCTCAATTTGTTGCAGAGGCATTGGCTCCTGATAATCCTCTGCTCAAGATAAGGTTTGTGGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCGCAACTTGGTCCTGAGCTAGCTTCAACCCTTGTAATAGTGATTTCAAAGAGTGGAGGTACCCCGGAGACTCGAAACGGTTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCCAGAATTGAGGGTTGGTTAGCTAGATTTCCCATGTTTGATTGGGTTGGAGGTAGAACGTCAGAGATGTCTGCTGTAGGCCTGCTTCCAGCAGCCCTTCAGGGCATTAACATTAGAGAAATGCTTGCTGGTGCAGCATTGATGGATGAGGCAAATAGAAGTACCGTGTTAAAGAGTAATCCTGCAGCTCTACTGGCTTTGTGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCATACAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAGCTGGTCATGGAATCACTAGGGAAGGAGTTTGACTTGGACGGCAATCGGGTCAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGTACAGATCAGCATGCCTATATTCAGCAACTGCGGGAGGGCGTGCACAATTTCTTCGCGACATTCATTGAGGTGCTACGTGATAGGCCCCCTGGTCATGATTGGGAACTTGAACCTGGTGTCACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGATCAGCTCTGTATGCTAATAACCGAGAGTCCATCACAGTGACTGTACAAGAAGTGACACCGAGATCTGTTGGTGCCCTAATTGCACTCTATGAACGAGCTGTAGGGATATATGCCTCCCTTGTCAACATAAATGCTTACCATCAACCAGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTATTAGCACTTCAGAAGCGAGTGTTGGCAGTGCTAAATGAGGCAAGCTGCAAGGAGCCTGTTGAGCCATTGACACTTGAAGAAGTAGCTGAGCGTTGCCATGCTCCAGAAGATATTGAAATGATTTACAAGATTATTGCTCACATGGCTGCCAATGACAGAGCACTCATTGCCGAAGGCAGTTGTGGTTCACCACGGAGCTTCAAGGTTTTTCTTGGGGAGTGTAATGTTGATGAATTGTATGCTTGA	2124	0.4831	MFKLNQPTNIAASISTQNQQKDKTTLHAVTTTTTETKLKTKSPLPQNNALFPSLIRGKKENIKCHNNLNLFPLPREIHSRLTLMASISSICSSSHTLKFRSHSLPLTNPLRKGSELVAFPTRPRLASDRTLSLVSTHSVAREVPAELSTVNDGVAAKKGGLEKDPRALWRRYVEWLYQHKELGLYLDVSRVGFTDEFVEEMEPRFQAAFKAMVELEKGAIANPDEGRMVGHYWLRDANRAPNTFLRTQIENTLEAICNFADDVLTGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPLLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGINIREMLAGAALMDEANRSTVLKSNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVAERCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSFKVFLGECNVDELYA*	708

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev08g1089	707	Pfam	Phosphoglucose isomerase	207	537	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	Pfam	Phosphoglucose isomerase	568	628	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	Gene3D	-	413	612	-	-
	Aev08g1089	707	CDD	SIS_PGI_2	462	626	IPR035482	-
	Aev08g1089	707	Gene3D	-	267	412	-	-
	Aev08g1089	707	ProSitePatterns	Phosphoglucose isomerase signature 2.	603	620	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	104	636	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	84	707	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	84	707	-	-
	Aev08g1089	707	CDD	SIS_PGI_1	250	416	IPR035476	-
	Aev08g1089	707	SUPERFAMILY	SIS domain	169	630	IPR046348	GO:0097367\|GO:1901135
	Aev08g1089	707	Hamap	Glucose-6-phosphate isomerase [pgi].	9	630	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	469	490	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	571	589	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	603	616	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	281	300	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	393	411	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aev08g1089	707	PRINTS	Glucose-6-phosphate isomerase signature	589	603	IPR001672	GO:0004347\|GO:0006094\|GO:0006096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g1089	Aev-Chr8	6628512	6633151	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g1089	K01810		-	gmx:100791285	1089.33

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev08g1089	08	6628512	6633151	Aev08g1089	08	6628512	6633151	ECH