Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1084 ATGGATTCTGTTTCCTTTCACGATGGCAACATACACGATATTCTTGAGACCCGATACCTTCACTCTCGCCTAGATGTTAATCAGAGTTTGCAGACACACTCGTCGTTGATTCGGAGACTTTCTCAAGAGAGGGAGTTAGAGGGTCACCTTGGCTGTGTCAATGCGGTGGCTTGGAATTCCACTGGTTCATTATTGATATCTGGATCAGATGATACACGGATTAATATTTGGAGCTATGCTGATCGAAAAATTCTGCATTCAATCGACACTGGTCATTCTGCAAATATATTCTGCACAAAGTTTGTACCAGAAACTTCTGATGAGCTTGTAGTCTCTGGAGCCGGAGATGCCGAAGTCCGATTATTTAATTTGTCTCACTTAAATGGGAGAGGATTTAGTGAAAATGCCATTGCTCCAACAGCACATTACCAATGCCACACTAGAAGAGTCAAGAAATTGGCTGTTGAAAATGGGAACCCCAATGTGGTATGGAGTGCTAGTGAAGATGGGACCCTGAGGCAGCATGATTTTCGGGAAGGTACCTCTTGTCCCCCAGCTGGATCTTCACACCAAGAGTGTAGAAATGTTCTACTTGATTTACGGAGTGGAGCTAAAAGGTCTCTTTCTGATCCTCCTAAACAAGTCCTTGCTCTAAAATCTTGTGATATTAGCTCAAGTAGACCACATTTACTCCTTGTTGGTGGGAGTGATGCTTTTGCGCGTTTGTATGATCGGAGGATGCTGCCGCCCCTAAGCTCCTGTCGGAAAAGAATGTCACCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAAGCCTGCACCTAACTCATGTTACATTTAGCCCCGATGGAGATGAGGTTCTCCTTAGCTTTAGTGGAGAGCATGTTTACTTGATGAATGTGAATCATGCTGGAGTGAATGAGATGCAGTATACTCCAGGAGATGTTTCAAAACTAATGACTTACTCTCCAACAATGAATGGGATAGAGTTGCAGCCTATTGTGTCTAATGTCTTACCAAATGGATTTTCTATGAAAAAGAAAGTTTCTGCAAAGATTGAGCATTGCAGCAAACTAATAAAATTTGCTAAAAATTCACTGGATGACGGGTCTCCCTATTATGGAATTGAGGCCTGTAATGAAGTTTTAAATAGCTACAGCCATATTATTGGGCCTGCACTACAATACGAATGCTTGTGTATTCGTGCTGCTCTGTTGCTTAAGAGGAAGTGGAAAAACGATGCTCATATGGCCATAAGAGACTGCTATGCTGCTAGGAAAATTGATAACTCCTCCTATAAAGCACTTTACTATATGTCAGAAGCATTGTCACAGTTAGGTAGACACAAAGAAGCTTTGGATTTTGCTGTTGCTTCCCAGTTGTTGGCCCCATCCTTATCTGAAGTTGCAGAAAGAGTGGAGAATGTGAAGAAGGATATTGCTTCGGTTGAGGCTGAGAAAAATAGTAAGACAAATGATGGATCATCAAGGTTTGATGGTCGAGGTGGGAGAATATTGTTAAGTGACATACTCTATCGTTCAGAGGCTAATAGTGATGGTTCGCAAGATGGTCCAAGATCTGAGAGGGATGATTCTGATTATGACGAAGAGTTGGAGTTGGATATTGAAACATCAATCTCTGGTGATGAGGGACATGATGTTGAGTCCGATGTTCTTCATGGGAGTTTAAATCTTAGATTTCACCGTAGAGATGACTCCAGAGAAAATGCTGGTGCAAATGGCTCATGTGAATCACCCTCATCGTCATCACAGAATGATAGAGCATACTATCAGCCTGAAGCAGCAATTGATATGAAACAGAGATTTATTGGCCACTGCAATGTTGGAACTGATATAAAACAGGCCAATTTTCTTGGTCAAAGAGGTGATTTTGTTGCTAGTGGAAGCGATGACGGAAGATGGTTTATTTGGGAAAAGCGGACTGGGAGACTCATAAAAATGCTGAATGGTGACCAATCGGTTGTAAATTGTGTACAGTGCCATCCATTTGATTTTGTTGTCGCAACTAGTGGGATTGATAGCACTATAAAGATATGGACTCCAAATGCTCCTGTTCCATCTGCTGTAGCTGGTGGTTCAGCAGGACCAGAAACTGCAGATGTATTGGTTGCTATGGAGAGCAATCAGCAAAGATTAGCTCGTAGTCATGATTCTATTCTGCCCTTTGAGCTTTTGGAACCGTTTAGAATGCATGAATTTCCTGAAGGATCACTTCGCTTGCGTCCATTTGAATGTGCCCAGAGCTAA 2289 0.4216 MDSVSFHDGNIHDILETRYLHSRLDVNQSLQTHSSLIRRLSQERELEGHLGCVNAVAWNSTGSLLISGSDDTRINIWSYADRKILHSIDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSHLNGRGFSENAIAPTAHYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSSHQECRNVLLDLRSGAKRSLSDPPKQVLALKSCDISSSRPHLLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGDEVLLSFSGEHVYLMNVNHAGVNEMQYTPGDVSKLMTYSPTMNGIELQPIVSNVLPNGFSMKKKVSAKIEHCSKLIKFAKNSLDDGSPYYGIEACNEVLNSYSHIIGPALQYECLCIRAALLLKRKWKNDAHMAIRDCYAARKIDNSSYKALYYMSEALSQLGRHKEALDFAVASQLLAPSLSEVAERVENVKKDIASVEAEKNSKTNDGSSRFDGRGGRILLSDILYRSEANSDGSQDGPRSERDDSDYDEELELDIETSISGDEGHDVESDVLHGSLNLRFHRRDDSRENAGANGSCESPSSSSQNDRAYYQPEAAIDMKQRFIGHCNVGTDIKQANFLGQRGDFVASGSDDGRWFIWEKRTGRLIKMLNGDQSVVNCVQCHPFDFVVATSGIDSTIKIWTPNAPVPSAVAGGSAGPETADVLVAMESNQQRLARSHDSILPFELLEPFRMHEFPEGSLRLRPFECAQS* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1084 762 SMART WD40_4 209 244 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 609 652 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 81 123 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 136 176 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 265 307 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 39 78 IPR001680 GO:0005515
Aev08g1084 762 SMART WD40_4 655 694 IPR001680 GO:0005515
Aev08g1084 762 Gene3D - 29 339 IPR015943 GO:0005515
Aev08g1084 762 Pfam WD domain, G-beta repeat 616 651 IPR001680 GO:0005515
Aev08g1084 762 Pfam WD domain, G-beta repeat 658 693 IPR001680 GO:0005515
Aev08g1084 762 Pfam WD domain, G-beta repeat 43 78 IPR001680 GO:0005515
Aev08g1084 762 MobiDBLite consensus disorder prediction 522 541 - -
Aev08g1084 762 ProSiteProfiles Trp-Asp (WD) repeats profile. 662 693 IPR001680 GO:0005515
Aev08g1084 762 SUPERFAMILY TPR-like 400 476 IPR011990 GO:0005515
Aev08g1084 762 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 10 761 - -
Aev08g1084 762 MobiDBLite consensus disorder prediction 585 601 - -
Aev08g1084 762 Coils Coil 473 500 - -
Aev08g1084 762 Gene3D Tetratricopeptide repeat domain 348 504 IPR011990 GO:0005515
Aev08g1084 762 Gene3D - 614 726 IPR015943 GO:0005515
Aev08g1084 762 MobiDBLite consensus disorder prediction 576 601 - -
Aev08g1084 762 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Aev08g1084 762 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Aev08g1084 762 SUPERFAMILY WD40 repeat-like 39 693 IPR036322 GO:0005515
Aev08g1084 762 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 10 761 IPR045151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1084 Aev-Chr8 6579936 6586745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1084 K11807 - gmx:100793917 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1084 08 6579936 6586745 Aev08g1084 08 6579936 6586745 ECH