Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1046 ATGGCGATGTGTAGGTGTGTCGATGTTTTGGTTGGAAGGAAGGAGAAAAACAAGGTTAATGAACGATCTTCAAAAGGGCACCTCAAAACTCTACTTGTTAAAGTAGAACATGCGAAGGCACCATCGGATTCTAAGGCTCGTGATTTGGAGCAACTCAATGATGATGTTATAGTTCTTTGTAGTAACCAGAAAATCTCAAGGAACAACGTGAGGGTTATGAACCATGAGAGTCCTGTGAAGACCGAAGCTGAGGAGGCTTATGAAGGGGAAGATGAGCACGAGGATTCACATTCCATCAAGAGGGAGCTCTCTGATATTGATCTCCAAGCTCATGAAGCTGCTGTGGCAACAAGGGAAGGAGGTTATGATCAAAGTCCAACAGATAAAGAGACGAAATACAGTGAAAAGAGCGATGAAATGAATCAAAGTGGACATGTGAGTGATCCTGGGATTGGCAAAGCAGACTTCTGGGCTACTCCAAAGCTCACGAGATCATGCTCTAACCTGGAAATAAGGGATGTGCTTAGGGAGACAAGCCATCATTTCCTATCCTCAAAGTCACAGTCTTTTGAGGATTTGCAGGAATTATCAGCAAATCAGGTGGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAAAGTGATGCTGAGAAGGCATTCCTCAAGCCAAGTTCTCCCTTCAGGGAGCAAAAGATTGTGGTGGAAGATGTTCCTCTGGAGCCACAGGAATATACATAGACCTCCCTTGAGCAAAGCAACACAAGTGCATCCTGCAATTGCTGCTCTAAACAGCCGATACGGGTACTCTTCAGACACCCTTGAACCGAAACAGAAGCCACTCAGTCATGTGGAATCACTTTCCCCCGGGTCATCTAGTGGGGAATTCTTTCGCAAAAGCTTCAGTGATAAAAATCTTGATAACCAAAGGAGGAGCCGATTACACAGTGAAAGTTTTGGTTTTTGGACACAAAACCAATGGGTGGCTTTCTCATCAGGATCATCCTCCTTTAACAGGGTGGACGAGTGGGTGAAGGAACTTGAAGTTCAGCAGCCACCACCTGAGGATGATTTTAAGCATGACAATATGGAAAGCATTGTCTTCCCACTTTCTCCTGATGCAGGTAAATCAATGGCAAGAACCATATCTCAGTTAAGTCGACATCCAGATGCAAATCTTTCAAAGGAGATTTTGCATGCTAATAGTGTGGTCCAGTCGCTGAATCCAGCCTCAACTGTAGCTCATATATCTGGTATTGGCATAAAAGCCATCCCTGCTATTTCACACTTCTCCAGCCTCCGCTCTGTCAACTTGTCAAGCAATTTCATAGTTCAAATTACACCTGGACTTCTCCCAAAGGGCATTCATACACTTAATTTGTCAAGGAACAAGATCAGCACCATTGAGGGCCTCAGAGAATTGACCCGGTTGAGGGTACTTGATCTGAGCTACAATCGCATCTCAAGAGTGGGACAAGGTTTATCAAGCTGCACATTAATCAAAGAGTTGTACCTTGCGGGGAACAAGATTAGTGATGTGGAGGGGCTACACAGGTTACTGAAGCTAACAGTTCTGGACTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGCCAGCTTGTGGCTAACTACAACTCTCTTCAGGCCTTGAATCTCCTTGGAAATCCAGTTCTAAGTAATGTCAGTGATGAGCAGTTGCGGAAAGCAGTTTCTGGTCTTCTTCCAAATCTTGTGTATCTGAACAGGCAATCTATCAAGCCTCAGAGGGCACGAGAAGTACTCACAGATAGTGTTGCTAAGGCCGCACTGGGAGACAGCAACCGCACCTACTACCGAAGGGCATCGAAGAAAGGTGGCCAAGGAGGATCAAGTTCCTCAAATGTGCATAGAAGCCGTGCTAGTTTTGCCCAGAAAAGCAAGAGCATGCCAAGGACCCGTAAAAATCATTAG 1965 0.4514 MAMCRCVDVLVGRKEKNKVNERSSKGHLKTLLVKVEHAKAPSDSKARDLEQLNDDVIVLCSNQKISRNNVRVMNHESPVKTEAEEAYEGEDEHEDSHSIKRELSDIDLQAHEAAVATREGGYDQSPTDKETKYSEKSDEMNQSGHVSDPGIGKADFWATPKLTRSCSNLEIRDVLRETSHHFLSSKSQSFEDLQELSANQVANLESPRSVMTHCSADKVMLRRHSSSQVLPSGSKRLWWKMFLWSHRNIHRPPLSKATQVHPAIAALNSRYGYSSDTLEPKQKPLSHVESLSPGSSSGEFFRKSFSDKNLDNQRRSRLHSESFGFWTQNQWVAFSSGSSSFNRVDEWVKELEVQQPPPEDDFKHDNMESIVFPLSPDAGKSMARTISQLSRHPDANLSKEILHANSVVQSLNPASTVAHISGIGIKAIPAISHFSSLRSVNLSSNFIVQITPGLLPKGIHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRVGQGLSSCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPVLSNVSDEQLRKAVSGLLPNLVYLNRQSIKPQRAREVLTDSVAKAALGDSNRTYYRRASKKGGQGGSSSSNVHRSRASFAQKSKSMPRTRKNH* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1046 654 MobiDBLite consensus disorder prediction 614 654 - -
Aev08g1046 654 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Aev08g1046 654 Pfam Leucine rich repeat 436 491 IPR001611 GO:0005515
Aev08g1046 654 ProSiteProfiles Leucine-rich repeat profile. 503 524 IPR001611 GO:0005515
Aev08g1046 654 SUPERFAMILY Outer arm dynein light chain 1 423 592 - -
Aev08g1046 654 MobiDBLite consensus disorder prediction 276 298 - -
Aev08g1046 654 MobiDBLite consensus disorder prediction 623 646 - -
Aev08g1046 654 MobiDBLite consensus disorder prediction 74 99 - -
Aev08g1046 654 PANTHER NISCHARIN RELATED 5 653 - -
Aev08g1046 654 MobiDBLite consensus disorder prediction 77 99 - -
Aev08g1046 654 SMART LRR_typ_2 478 501 IPR003591 -
Aev08g1046 654 SMART LRR_typ_2 434 457 IPR003591 -
Aev08g1046 654 SMART LRR_typ_2 523 545 IPR003591 -
Aev08g1046 654 MobiDBLite consensus disorder prediction 123 142 - -
Aev08g1046 654 SMART LRR_sd22_2 478 500 - -
Aev08g1046 654 SMART LRR_sd22_2 501 522 - -
Aev08g1046 654 SMART LRR_sd22_2 523 544 - -
Aev08g1046 654 SMART LRR_sd22_2 456 477 - -
Aev08g1046 654 MobiDBLite consensus disorder prediction 113 151 - -
Aev08g1046 654 Pfam Leucine Rich repeat 525 537 IPR001611 GO:0005515
Aev08g1046 654 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 5 653 - -
Aev08g1046 654 Gene3D Ribonuclease Inhibitor 500 596 IPR032675 -
Aev08g1046 654 ProSiteProfiles Leucine-rich repeat profile. 525 546 IPR001611 GO:0005515
Aev08g1046 654 Gene3D Ribonuclease Inhibitor 395 499 IPR032675 -
Aev08g1046 654 ProSiteProfiles Leucine-rich repeat profile. 458 479 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1046 Aev-Chr8 6336947 6339230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1046 429 587 Receptor kinase-like Gene Family AT5G56040 32.768 2.08e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1046 - - gmx:100810094 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1046 08 6336947 6339230 Aev08g1046 08 6336947 6339230 ECH