Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1036 ATGGAGAGGAGCACTCCTGTGAGGAAGCCCCACACATCAACGGCAGATCTGCTTACTTGGTCGGAGACTCCACCAGCTGATTCCCCAGCTCCTCCGTCCTCCGCCTCTCGCTCCTCCCTTCGTTCTCACCAGCCGTCCGATGGGATCAGCAAGGTGGTGTTTGGCGGTCAGGTCACCGATGAAGAGGTCGAGTCCTTAAACAAACGAAAGCCCTGTTCAGAGTATAAGATGAAGGAGATCACTGGTAGTGGGATCTTTGTAGGTGATGGAGAAAATGACGCGCCAGAAGCTGGCAGTGCCAACCCTCCCAATAAAACAGGACTGCGAATGTACCAGCAAGCAATTGCAGGAATCAGTCATATCTCCTTTGGCGAGGAGGAGGGTGTTTCGCCAAAAAAGCCTACTACTTTGCCAGAGGTGGCCAAGCAGCGTGAGCTAAGTGGAACTCTGGAAAGTGAAGACTCCAAATTGCAAAAACAGCTTTCTGATGCAAAGTTCAAGGAGATTAGTGGTCATGACATATTTGCTCCGCCACCAGAAATCAAACCCCGCCCAATAACTCCTCGCATACTTGAGTTGAAAGGGAGCATAGATATTGGAGAACCTAATTCACAACATGCTGAAGGAGGAGATCAAGGCAACTCTAATGGGGAGCCACTTAAGACAGCAAAGAAAATCTACAACCAGAAATTTGCGGAGCTTTCAGGAAACGACATATTCAAGGGTGATGCACCTCCTTCATCTGCTGAGAAATCGCTGAGTGGGGCTAAACTACGGGAGATGAGTGGCAGTAACATCTTTGCTGATGGTAAGGTAGAATCTAGAGACTACCTTGGTGGCGTACGGAAGCCACCCGGTGGCGAGAGCAGCATCGCATTGAAACAAGCAATGTTGAAGATACAGGACAATACCAATAGGAGGAGTGCAGAGAGCACAAGGTCGAGGAGGGATGAGGAAACGAGGTTGTTGGGTATTCCCAACGCGCCGCCGCCAGGTCTGAACCTTCGACCCGACCACGTTGCCGTCGGGTCTCCTCTCTCTGCCTCCAGGCTCTCTTCTTCTTCTCAGTCCCCTTTCTCCAACAACGGGTCCCGGTTCTCTGGCGACGGTTGTGGTGGCTCTCCGTTTCGCGGCGGCGATCACCACTCTGTTAATAACGCTAGGCTCTGGTTGGACTCAGAGTCCTCGAGTTTTCAGTTTGAGAAGAGTTTCAACGACGCATGGGTCGATGATCTGGGAGGACTCACCAGGGATTTCAATAGAATGAACATTGTTGATGGAACAAAAAACAGAGGATCATACGACGTCAACCCATACGCTTGTTCTTTAGATGCAAATATGCCCTTTTTGAACGAAACGGGAACACCATATTGCAATGCGGGAGTTTCGGTTCAACCGGGTGGTTTTGTTGGTAAAGGCTACGCTTTTGAGCCTTCTCTGGCTCATGATCGCCATGTGTATCATCAACTCATGGACCAGAGGATGATGAAACAGGGGACAAATGGCCATGAAGGGCAAGTTCAGTTGCAGAAACCACAATCACCTTTCGTTAATCCCTTCGTTTGTGATCATTTTGTGGGGTCACAGCATTTTGGGATGGAGTGTAATGAAGCTGGTTGGGGAGCAAGGAACCCTCTTAGATTCTCTCAGTCTCAGGTACTGCACTCCAGGGTTGGCGTGAACCCCAATGGCAACACCCCTCTATCAAACTATTTTCCTCCAGCGAGGGAAATTGCAATGGCGGTTGCAGCTGCAAACAGTAACAACGAACTCTCACAATGTCACTCTCCAAGGAGAAGCGGAAACGACTCTGCTACATTTAGGTGTGACAACAGCATCATCATTGAAGGGAAAGGTGTGAAGCCCTGCATTGAAACCGGGTACCCCTCTCTGAGGGGCTACAAGAAGGGTCACTCTGATGATGTTGCGAATCAAGTCATGGGAGATAACAATGTCTCTAGGCACGTTTCCCATCACTCTCGTGGTGGCCAAATTTGTGGGAACAATAGTGGTGTTTCTAGGGATTCATCACTGCCCTTTATGCTGAATTTGTATAATATGGCTGAGGTGCAGGGCTACATGTACAATATGGCCAAGGACCAGAACGGTTGTCGCTTCCTGCAGAGGATGGTTGAGGAAGGGACGTACGAAGATATGAGGACTGTTTTTGATGGAATAATTGATAATGTGGTTGAGCTTATGGTGGACCCTTTTGGGAATTATCTTGTGCAGAAGTTGCTGGAGCTGTGCGTCGAAGAACAAAGGTTTCAGATTGTGCTCATGTTGACTAAAGAACCAGGCCAACTTGTTCGAATCTCCTTAAATACACACGGCACGCGCGTGGTGCAGAAGCTGATTGAGACCCTCGATTCCTCCAAACAAATTTCCTTGGTGAAGACTGCCATTCAACCTGGTTTTCTTGATCTTATTAAGGATTTGAATGGAAATCATGTCATACAAAGATGTTTGCACTGCTTTAGCCCTCAAGATAACGAGTTTATCTTTGATGCTGGCGTGAAGTATTGTGTTGACATAGCTACTCATCGACACGGATGTTGTGTTCTGCAACGCTGCATTGATCATTCAGTGGGAAAACATCGTGATAAGTTGGTCGCTGAAATTTGCAAGCATGGCCTTCTCCTCTCTCAAGATCCATTTGGAAACTATGTAGTTCAATATATATTAGAGGTGGAGGCGCCAACAGCATCAAGCAAACTGCTGTGTCAGCTGAAAGGGAACTACGTGAACCTGTCAACACAAAAGTTTAGCAGCCACTTAGTTGAGAAAGTCCTGAGGCATGTTCCGGATAGCAGGTCTAGGGTTGTCCGAGAGTTACTCTCTGCACCCCACTTCGAGCAGTTATTGCAAGACCCTTTTGCCAACTATGTCATTCAATCTGCTCTTGCAATGACCAAGGGTCCTCTTCATGCAACCCTGGTGGAAGCTGTTCGGCCTTACAAAATTCTGCGCACAAGCCCATACTGCAAGAGGATTTTCTCTGGTCTCAAGAAGTGA 3015 0.4819 MERSTPVRKPHTSTADLLTWSETPPADSPAPPSSASRSSLRSHQPSDGISKVVFGGQVTDEEVESLNKRKPCSEYKMKEITGSGIFVGDGENDAPEAGSANPPNKTGLRMYQQAIAGISHISFGEEEGVSPKKPTTLPEVAKQRELSGTLESEDSKLQKQLSDAKFKEISGHDIFAPPPEIKPRPITPRILELKGSIDIGEPNSQHAEGGDQGNSNGEPLKTAKKIYNQKFAELSGNDIFKGDAPPSSAEKSLSGAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALKQAMLKIQDNTNRRSAESTRSRRDEETRLLGIPNAPPPGLNLRPDHVAVGSPLSASRLSSSSQSPFSNNGSRFSGDGCGGSPFRGGDHHSVNNARLWLDSESSSFQFEKSFNDAWVDDLGGLTRDFNRMNIVDGTKNRGSYDVNPYACSLDANMPFLNETGTPYCNAGVSVQPGGFVGKGYAFEPSLAHDRHVYHQLMDQRMMKQGTNGHEGQVQLQKPQSPFVNPFVCDHFVGSQHFGMECNEAGWGARNPLRFSQSQVLHSRVGVNPNGNTPLSNYFPPAREIAMAVAAANSNNELSQCHSPRRSGNDSATFRCDNSIIIEGKGVKPCIETGYPSLRGYKKGHSDDVANQVMGDNNVSRHVSHHSRGGQICGNNSGVSRDSSLPFMLNLYNMAEVQGYMYNMAKDQNGCRFLQRMVEEGTYEDMRTVFDGIIDNVVELMVDPFGNYLVQKLLELCVEEQRFQIVLMLTKEPGQLVRISLNTHGTRVVQKLIETLDSSKQISLVKTAIQPGFLDLIKDLNGNHVIQRCLHCFSPQDNEFIFDAGVKYCVDIATHRHGCCVLQRCIDHSVGKHRDKLVAEICKHGLLLSQDPFGNYVVQYILEVEAPTASSKLLCQLKGNYVNLSTQKFSSHLVEKVLRHVPDSRSRVVRELLSAPHFEQLLQDPFANYVIQSALAMTKGPLHATLVEAVRPYKILRTSPYCKRIFSGLKK* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1036 1004 MobiDBLite consensus disorder prediction 207 222 - -
Aev08g1036 1004 MobiDBLite consensus disorder prediction 192 224 - -
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 725 761 IPR001313 GO:0003723
Aev08g1036 1004 MobiDBLite consensus disorder prediction 32 46 - -
Aev08g1036 1004 Gene3D - 682 1004 IPR011989 -
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 768 795 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 729 759 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 694 727 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 806 836 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 950 968 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 841 875 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 913 945 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Pumilio-family RNA binding repeat 880 897 IPR001313 GO:0003723
Aev08g1036 1004 MobiDBLite consensus disorder prediction 123 159 - -
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 801 836 IPR001313 GO:0003723
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 764 799 IPR001313 GO:0003723
Aev08g1036 1004 MobiDBLite consensus disorder prediction 1 71 - -
Aev08g1036 1004 MobiDBLite consensus disorder prediction 237 256 - -
Aev08g1036 1004 CDD Pumilio 692 1000 IPR033712 GO:0003723
Aev08g1036 1004 SUPERFAMILY ARM repeat 688 1000 IPR016024 -
Aev08g1036 1004 MobiDBLite consensus disorder prediction 299 378 - -
Aev08g1036 1004 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 668 1004 IPR033133 GO:0003723
Aev08g1036 1004 PANTHER PUMILIO HOMOLOG 7, CHLOROPLASTIC-RELATED 489 1000 - -
Aev08g1036 1004 SMART pum_5 873 908 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 725 760 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 689 724 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 909 943 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 837 872 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 801 836 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 946 981 IPR001313 GO:0003723
Aev08g1036 1004 SMART pum_5 764 799 IPR001313 GO:0003723
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 873 908 IPR001313 GO:0003723
Aev08g1036 1004 Pfam Protein of unknown function (DUF4057) 3 292 IPR025131 -
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 909 947 IPR001313 GO:0003723
Aev08g1036 1004 MobiDBLite consensus disorder prediction 86 106 - -
Aev08g1036 1004 MobiDBLite consensus disorder prediction 306 322 - -
Aev08g1036 1004 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 489 1000 - -
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 689 724 IPR001313 GO:0003723
Aev08g1036 1004 MobiDBLite consensus disorder prediction 346 368 - -
Aev08g1036 1004 ProSiteProfiles Pumilio RNA-binding repeat profile. 837 872 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1036 Aev-Chr8 6243428 6251805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1036 - - aip:107608433 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1036 08 6243428 6251805 Aev08g1036 08 6243428 6251805 ECH