Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1009 ATGGGTTCAGTTTTCAGTGTTGGGAATACCAAATCTGATCAGAGTGAGTGGAATGAGGTCTCTCCGAACCAGACATTCAAGAGGCAAAAGATGTCTTGTACATTCGATGAGGAGAGTCCAAGGCTAATCCCTAATCTCCCTGACGAGTTATCGCTTCAGATTATTGCTAGACTTCCTAGAATCTGTTACTTCAATGTAAGGTTGGTTTCAAGGAAGTGGAAGGAAACTGTCACGAGTTCGGAACTATACAAAGTAAGAAAAGAACTCGGGACAACCGAAGAGTGGCTATATCTGTTGATAAAGGTTGGAGATAATAAGCAGCAGTGGCATGCCGTGGATCCTCATTCTCGGATGTGGCAGAGACTGCCTATTATGCCTAAAGTTGCTGAAGAAGAAGAATCCAGAAAGGGTTCGTCTAAGATATGGATGTGGAACATGGTGGAGAGCATCAGAATTGCTCAAGTTATTAGAGGCTTTCTTGGACAGAAGGATGCATTTGATGAAATGCCCTTTTCCGGTTGTGCTATTGGAGCTGTTGGTGGAAGCCTCTATGTTCTCGGCGGATTCTCTAAAGCTTCAACTGTGAGGTGTGTGTGGCGATTCGATCCGATCCAGAATACGTGGAGCAAGGTGACTCCTATGTCTACAGGCAGAGCATATTGCAAGACAGGCATTTTGAATAACAAGCTTTATGTTGTTGGAGGTGTTAGTCAAGGTCAAGCAGGACTAATTCCTCTTCAATCTGCCGAAGTTTTTGATCCTTCTTCAGATGCATGGTCACCTGTGCCGAGCATGCCGTTCTCGAAAGCTCAAGTTCTGCCGACAGTTTTTTGGGCTGACATGTTGAAGCCTATTGCTACAGGATTGACCTCATACATGGGAAGATTGTGTGTTCCACAAAGTTTGTACTCATGGCCCTTTTTTGTTGATGTTGGAGGAGAAATCTATGATCCTGAAACAAACTCATGGATAGAAATGCCGACCGGGATGGGCGAGGGTTGGCCTGCGAGGCAAGCAGGCTCGAAATTGAGTGTCGTAGTGGACGGTGAATTGTATGCTTTTGATCCTTCCAATTCTACAGATAGTGGAAGGATCAAGGTATATGATCAAGGAGAAGATGCTTGGAAAGTTGCCATTGGAAAAGTCCCAATATATGATTCAGCTAATTCTGAGTCTCCATATTTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGATGCCAATCATGATGTTGCTGTCCTGCAAGCTGGTCTGCGCAACAATTGGGATCCTTCACCATCAACCTCAACCAGTCCCTTCCATGAATTGCCGGAAACCGGCGCCGAATCGGAACCGGTTGTCTGGAAGGTAGTTGCCAGCAAGGGTTTTGGGAAGGTTGAACTAGTCAGTTGCCAAGTTATTGATATCTAG 1419 0.4496 MGSVFSVGNTKSDQSEWNEVSPNQTFKRQKMSCTFDEESPRLIPNLPDELSLQIIARLPRICYFNVRLVSRKWKETVTSSELYKVRKELGTTEEWLYLLIKVGDNKQQWHAVDPHSRMWQRLPIMPKVAEEEESRKGSSKIWMWNMVESIRIAQVIRGFLGQKDAFDEMPFSGCAIGAVGGSLYVLGGFSKASTVRCVWRFDPIQNTWSKVTPMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSSDAWSPVPSMPFSKAQVLPTVFWADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPTGMGEGWPARQAGSKLSVVVDGELYAFDPSNSTDSGRIKVYDQGEDAWKVAIGKVPIYDSANSESPYLLAGFHGKLHVITKDANHDVAVLQAGLRNNWDPSPSTSTSPFHELPETGAESEPVVWKVVASKGFGKVELVSCQVIDI* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1009 472 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 472 - -
Aev08g1009 472 Pfam F-box-like 43 84 IPR001810 GO:0005515
Aev08g1009 472 SMART kelc_smart 229 279 IPR006652 GO:0005515
Aev08g1009 472 SMART kelc_smart 182 228 IPR006652 GO:0005515
Aev08g1009 472 SUPERFAMILY F-box domain 39 123 IPR036047 GO:0005515
Aev08g1009 472 MobiDBLite consensus disorder prediction 1 21 - -
Aev08g1009 472 SUPERFAMILY Kelch motif 96 405 IPR015915 GO:0005515
Aev08g1009 472 Gene3D - 97 383 IPR015915 GO:0005515
Aev08g1009 472 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Aev08g1009 472 Gene3D - 41 96 - -
Aev08g1009 472 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 472 - -
Aev08g1009 472 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Aev08g1009 472 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Aev08g1009 472 SMART fbox_2 46 86 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1009 Aev-Chr8 6024792 6026210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1009 36 270 Miscellaneous Gene Families AT4G33900 23.207 3.25e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1009 - - gmx:100806691 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1009 08 6024792 6026210 Aev08g1009 08 6024792 6026210 ECH