Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1002 ATGGAAGATCAGAAGAAAGAATCGGTGGTAGAATGTTCGGAATTCATCGACATCGTCAAGCTCTCCCCACCGGCGAAGCTCTTGCCGGAATTCACCAAGGATCTGAAGGCACCGTCCGGAAAGCAGCGGCGCCGCGGCGACACGTGGGTGGTGTCGGTGTTCGTGATCATCCACGTCGGCGTGTTCATCGCCACGATGCTCGTCAACGACTGCTGGAACAACTCTCACGGCGACTGCGCCCTCCAGCCCCTCGGAAGGTTCTCCTTCCAGCCTCTCTCCGAGAACCCTCTCTTAGGCCCTTCTAACTCCAAGCTAGATGAAATGGGAGCAATTCGACGCACTTTTCTGACAGAGTATCATCAAACATGGCGTCTTTTCACATTTCCATTTCTTCATGCTGGACTCTTCCATCTCCTCATCAATCTCTGCAGCGTCATCTTCGTCGGAATTCACCTAGAGCGCGAGCTTGGACCGCTGAGGATTGGTGTAATCTATACACTCTCTGCTTTTGTTGGTGCCTTGGTGGCTTCTCTGTTTGTGCAAAACACCCCAGCTGTTGGATCTTCTGGTGCTTTGTATGGATTGCTCGGAACATTACTCTCTGAACTAATTTGGAATTGGGAATTTCAAACCAAAAAGGTTTCAGCAGTGGCATCGTTAATCTTGGTCTGGGTGGGCAATTTTGTGCTTGGTTTTCTTCCTTATGTCGACAACTTCTCGAGCATTGGAGGTTTCATATCAGGGTTCCTTCTTGGATCAGTTCTTTTACTCAGCAGGAAGCTCCACCTAGTAGCTCAGAAAAAGGGGAGTCTGTTTGATTATGGTGTCAAGAATTACATCAAGTTGAAGTTGAAGCAAAACATGGACAGACCAGTCCTCAGGATTGTTTCTCTTATCCTCTTCACCCTACTGTTGGGTGGTTGTCTTGTGGCAGTTCTTCATGGGATCAACATCAACAGTTATTGCACATGGTGTGCATATGTTGACTGCATCCCTTATAGTAGCTGGCGCTGCAAAGACAGAGAATCCTCTTGTGAGACAATGGTGAGCGATGAGCAGCTGACAATGACCTGTATGGGGAATGGCAACTTCATGGTCTTTCCTTTTACCAACATCTCTCGAGCTAGGATAAATGATTTGTGCGATCTGATATGCGTATAG 1161 0.4806 MEDQKKESVVECSEFIDIVKLSPPAKLLPEFTKDLKAPSGKQRRRGDTWVVSVFVIIHVGVFIATMLVNDCWNNSHGDCALQPLGRFSFQPLSENPLLGPSNSKLDEMGAIRRTFLTEYHQTWRLFTFPFLHAGLFHLLINLCSVIFVGIHLERELGPLRIGVIYTLSAFVGALVASLFVQNTPAVGSSGALYGLLGTLLSELIWNWEFQTKKVSAVASLILVWVGNFVLGFLPYVDNFSSIGGFISGFLLGSVLLLSRKLHLVAQKKGSLFDYGVKNYIKLKLKQNMDRPVLRIVSLILFTLLLGGCLVAVLHGININSYCTWCAYVDCIPYSSWRCKDRESSCETMVSDEQLTMTCMGNGNFMVFPFTNISRARINDLCDLICV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1002 386 PANTHER RHOMBOID-LIKE PROTEIN 8 40 385 - -
Aev08g1002 386 Pfam Rhomboid family 118 257 IPR022764 GO:0004252|GO:0016021
Aev08g1002 386 Gene3D - 43 263 IPR035952 -
Aev08g1002 386 PANTHER RHOMBOID-RELATED 40 385 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aev08g1002 386 SUPERFAMILY Rhomboid-like 46 260 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1002 Aev-Chr8 5990691 5992395 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1002 - - gmx:100775875 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1002 08 5990691 5992395 Aev08g1002 08 5990691 5992395 ECH