Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0999 ATGGCTGCTTCTGTGTGCAACCAATCTCTACTGGTTTTGTGTCCTTGTTCCACTTCCTTCTCTTCTTCGAAGCCCTTTCAAATTCATCTCAAAACCCTACCTTTCCATTCCCATCTCACCACCTTAGGGTTTCAGCTTCGGACCAAATCCTCCTCCTCTGTTAATCGAAGGACCACCCTCGTCAACTCTTCCCAAGATTCCTTTCCAAAGATAAATGATGAGACAGAGGATGCTCTGAATGGTGTAAGAGTCGCAGAGGACGATGAAGATAAAATCTCTTTACCCAGCTTAATGGCCCTCCTTGAAGCATACAAGGAAGCCATTCTTAACAGGGATGAAAGAACTAGATCTTTGATTGAAATCAGAATACAGTCAATTGCAAATAATAAAACTAATCTGATTCAAAAAGTATCAGCTCTATCAGCAGAGAAAGTTGCTTCTAAGGAGAAATGTCTTCGCTTACAAGCAGACTTTGATAATTTTAGGAAAAGGACTGAGAAAGAAAGACTCAGAATCCAGTCTGAAGCTCGGGAAGAATTCATTGAAAAACTTCTGTTGATGGTGGACAATTTTGAGAAAGCCAAACAACAAATTAAAGGGGCAACAGACAAAGAGAAGAAGATTGATACAAGCTATCAAGGTATTTACAAGCAATTCGTAGAAGTCATGAGGAGCAATAATGTTTCTTTGATACCAACTGTGGGAAAACCTTTCAATCCATTGCTACATGAAGCCATTGCACGTGAGGAGTCCCAAGAGTTCAAGGAAGGGATCATAATAAAAGAAACCCGGCGCGGTTTCTTGCTCAAAGATCGGGTTCTAAGGCCTGCACTTGTCAAGGTTTCCTTAGGGCCTGGCAGTAAAAAATCTACGGTATCTCCTGATCAATCCAAGGAGCAGCCTTCAGCAGCTGCTGGAGTAGATGAAAGATAG 933 0.4169 MAASVCNQSLLVLCPCSTSFSSSKPFQIHLKTLPFHSHLTTLGFQLRTKSSSSVNRRTTLVNSSQDSFPKINDETEDALNGVRVAEDDEDKISLPSLMALLEAYKEAILNRDERTRSLIEIRIQSIANNKTNLIQKVSALSAEKVASKEKCLRLQADFDNFRKRTEKERLRIQSEAREEFIEKLLLMVDNFEKAKQQIKGATDKEKKIDTSYQGIYKQFVEVMRSNNVSLIPTVGKPFNPLLHEAIAREESQEFKEGIIIKETRRGFLLKDRVLRPALVKVSLGPGSKKSTVSPDQSKEQPSAAAGVDER* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0999 310 MobiDBLite consensus disorder prediction 283 310 - -
Aev08g0999 310 MobiDBLite consensus disorder prediction 286 300 - -
Aev08g0999 310 Gene3D Head domain of nucleotide exchange factor GrpE 228 282 IPR009012 GO:0006457
Aev08g0999 310 Hamap Protein GrpE [grpE]. 65 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 133 224 IPR013805 -
Aev08g0999 310 PANTHER GRPE PROTEIN 1 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 CDD GrpE 148 281 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 Gene3D - 112 224 IPR013805 -
Aev08g0999 310 PANTHER GRPE PROTEIN HOMOLOG 1 301 - -
Aev08g0999 310 Pfam GrpE 128 282 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 PRINTS GrpE protein signature 180 195 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 PRINTS GrpE protein signature 152 168 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 PRINTS GrpE protein signature 235 250 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 PRINTS GrpE protein signature 262 281 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev08g0999 310 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 229 283 IPR009012 GO:0006457
Aev08g0999 310 ProSitePatterns grpE protein signature. 238 281 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0999 Aev-Chr8 5968267 5970406 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0999 K03687 - gmx:100809893 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0999 08 5968267 5970406 Aev08g0999 08 5968267 5970406 ECH