Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0996 ATGAAAAACGCCGACGTTTTCTTAGGCCTTAATGACTTCCTTGAGAAGATGCGCCAACCCTCCGCCGCCGATTTCGTCAAAGCTATCAAAAGTTTCATTGTTTCGTTTTCAAATAATGCTCCTGATCCAGAGAGGGACAGTGGTGCTGTCCAAGATTTCCTTTCCAATATGGAAGGTGCTTTTAGGGCTCATCCACTCTGGTCTGGTTGCTCTGAGGAGGAGCTTGAAAGTGCCGGTGAAGGGCTTGAGAAGTATGTCATGACGAAGTTATTTTCCCGTGTATTTGCTTCTCTTCCGGACGATGTAAAACTCGATGAACAACTTTCACAGAAGATGGCTTTGGTTCAACAGTTTATTCGGCCAGAAAATTTGGATATCACGCCAGCTTTTCAAAATGAAACATCATGGTTGCTCGCACAGAAAGAATTACAAAAGATCAACATGTACAAGGCACCCAGGGACAAACTTGTCTGCATCCTGAATTGCTGCAAGGTTATTGGTAACTTGCTGCTTAATGCTTCTCTCGCTTCCAAAGATAATCCTCCAGGAGCTGATGAGTTTCTTCCTGTGCTAATTTATGTTACCATAAAGGCAAACCCTCCACAACTGCACTCAAATCTACTTTACATACAAAGGTATAGACGCCAATCTCGATTGGCTGGGGAAGCAGCATATTACTTTACAAACATGCTCTCTGCTGAGTCGTTCATCTCAAACATTGATGCAAAAGCCATTTCAATGGATGAAAGTGAGTTTGAGAGAAACATGGAATTTTCCCGTGCCCTTCTTTCAGGGCTTTCAGTTAATGCGCAAGATCCCGGTTCGCCTTATCAAAATCATGGACACCAGGCAAAAGCAGAGTCCACTGAGCACAAAAGCAAAGCTTTAAATGATAATGACGACCCTGCATTACAAAATGCATCATCTGCCATAAAATCCGAAAGTAAGAAAGTGACTTTCACAGATGAGTCATTGATCACAAAGGTTCCATCGCTCTCAGATTTGGAGAACAAAGGGGCAAGTATGCTACTAAAGGAGGATAAGGTGAATGAAGTTTTCAGGGAATACCCATATTTGTTTGCAAGTGTTGGTGACCTAACAGTAGGTGATGTTGAAGATCTACTAAACAATTACAAACAACTTGCTTTCAAGTATGTGTGCCTTTCCAAGGGGCTAGGCATCTCTACTACTTCTCATCCTCCATCTAATCCACCAAATAATGTACAAGATCATGCTGAAACAACAACAGAATCTTCAGATGGTGCCAATGATAAATCAGAAAAACCTACTTATTCAGGTACAACAGAGGATAGTTCAGAAAAAGTTCCAGTTCTTGAGGAGAAAACAATTGATTCTGTTGTGCCACAGGATGAGGCAGTTGAACCTGAAGGTGTGGCCAACTTAGAGGATCTAATTAGTGGGAACTAG 1428 0.4202 MKNADVFLGLNDFLEKMRQPSAADFVKAIKSFIVSFSNNAPDPERDSGAVQDFLSNMEGAFRAHPLWSGCSEEELESAGEGLEKYVMTKLFSRVFASLPDDVKLDEQLSQKMALVQQFIRPENLDITPAFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVIGNLLLNASLASKDNPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLAGEAAYYFTNMLSAESFISNIDAKAISMDESEFERNMEFSRALLSGLSVNAQDPGSPYQNHGHQAKAESTEHKSKALNDNDDPALQNASSAIKSESKKVTFTDESLITKVPSLSDLENKGASMLLKEDKVNEVFREYPYLFASVGDLTVGDVEDLLNNYKQLAFKYVCLSKGLGISTTSHPPSNPPNNVQDHAETTTESSDGANDKSEKPTYSGTTEDSSEKVPVLEEKTIDSVVPQDEAVEPEGVANLEDLISGN* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0996 475 MobiDBLite consensus disorder prediction 396 475 - -
Aev08g0996 475 MobiDBLite consensus disorder prediction 269 309 - -
Aev08g0996 475 SMART vps9_2 135 255 IPR003123 -
Aev08g0996 475 MobiDBLite consensus disorder prediction 396 416 - -
Aev08g0996 475 PANTHER BNAC09G47180D PROTEIN 1 410 - -
Aev08g0996 475 Pfam Domain of unknown function (DUF5601) 27 91 IPR041545 -
Aev08g0996 475 Gene3D - 17 97 - -
Aev08g0996 475 MobiDBLite consensus disorder prediction 284 298 - -
Aev08g0996 475 SUPERFAMILY VPS9 domain 11 257 IPR037191 -
Aev08g0996 475 MobiDBLite consensus disorder prediction 425 439 - -
Aev08g0996 475 Gene3D VPS9 domain 99 264 IPR037191 -
Aev08g0996 475 MobiDBLite consensus disorder prediction 440 454 - -
Aev08g0996 475 MobiDBLite consensus disorder prediction 269 283 - -
Aev08g0996 475 Pfam Vacuolar sorting protein 9 (VPS9) domain 138 241 IPR003123 -
Aev08g0996 475 ProSiteProfiles VPS9 domain profile. 102 246 IPR003123 -
Aev08g0996 475 PANTHER RAB GDP/GTP EXCHANGE FACTOR 1 410 IPR045046 GO:0005085|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0996 Aev-Chr8 5949585 5953048 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0996 K20131 - gmx:100810958 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0996 08 5949585 5953048 Aev08g0996 08 5949585 5953048 ECH