Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0977 ATGCTCTCTTCATACACCAATTCTGGGAGGCCTCGTGAGGCTCTTTCACTCTATAACAACTTGCTGCAATCCCAAACAGAGCAACCCAATCCGTTCCTGTACTCTTCGGTTCTCAAGGCATGTGGTCTTGTGAAAGATGTTGAGCTGGGCAAGATGGTTCACCGACAGATATCTGAAGCTAGGTTGGAGTTGGACACTGTTCTGATGAATGCGCTCTTGGACATGTATGTCAAATGTGGGAACTTGAGGGATGCAAAACGTGTTTTTCATGAAATCCCATTCAAGAACTCGACTTCGTGGAACACCCTCATTCTGGGTCACATGAAATGGGGCTTGATTGATGATGCGCTGAACCTGTTTGATCAAATGCCGGATAAGGATGTTGTTTCTTGGAATAGCATTGTTGCTGGTCTTGCTGAAAATGCTAGTCCCTATGGATTGAATTTTGTTGCTATGATGCACTTGAAAGGCTTTAAGCTAGATGAATTCACATTCCCGTGTGCTCTCAAAGCATGCGGTCATCATGGTGACTTGACCATGGGGAGACAGATTCATTGTTGTATTATCAAGTCGGGGTTTGAGCCTTGCTGTTATTGTACATCGGCGTTGATTGATATGTACTCGAATTGCAAGTTGTTGGATGAAGCAGTGACGATATTTCATCGATTCTTCAGAGACTCTGATGTTGCTGAAAGCTTGACACTTTGGAACTCTATACTTTCTGGGTATGCTGCCAACGGAGATTCTACAAAGGCTCTTAGTCTGATTGTACATATGCATCATTGTGGTGTTTATTTTGATTCCTACACCTTTAGTATTGCTTTAAAGGTTTGTATGTACTTTCCGAGCTTGAGGTTGGCATCTCAAGTACATGGTTTGGTCATCACCAGTGGCTATGAGTTGGATTATGTTGTTGGAAGCATTCTTATTGATCTTTATGCAAAACAGGGCAATATTAATCATGCATTGAGATTGTTTGAAAAGTTGCCAGATAAAGATGTTGTGGCTTGGTCTAGTTTGATTGCTGGTTGTGCTAGATTTGGCTTAGATATGTTAGCTTTGACACTCTTTATGAATATGATTCATTTGGATCTTGAGATTGACCACTTTGTCCTTTCAATTGTTCTGAAAGTTTCTTCAAGTTTGGCATCTCATCAAAGTGGAAAGCAAATTCATGCTTTCATTCTTAAGAAGGGGTATGAGTCCGAGAGAGTTATTACAACTGCTCTTATCGATATGTACTCAAAATGTGGTGAAATTGAGGATGCCTTGGCTTTGTTCCAAGGTCTTTCAGAAATAGATACCATGTCTTGGACGGGGATTATTGTGGGATGCGCACAAAATGGAAGAGCAGATGAAGCTATTAATCTTCTGCATAAGATGATAGAATCTGGTAAAAAGCCAAACGAAATCACCATTTTAGGTGTTCTTACTGCTTGTAGGCATGCTGGTTTAGTTGAAGAGGCATGGACCATATTTAATTCTATTGAAACAGAGCATGGATTGATACCATGCCCGGAACATTACAATTGTATGGTTGATCTACTTGGTCAAGCAGGACGTTTCAAAGAAGCATTGAAATTGATTAATGACATGCCATTTAAGCCTGACAAAACAATATGGTGTTCCTTGCTTGGGGCTTGTGGAACTCACAAGGACCAATATCTTGCAAATATTGTTGCTGAGCATCTTCTTGCTACTTTTCCAGAAGATGCTTCTGTATATGTGATAGTATCAAATGTTTATGCAACTCTTGGAATGTGGGATAGTTTAAGCAAAGTTAGAGAAGCTGTCAAAAAAGTAGGCTTAAAAGGAGCTGGAAAAAGCTGGATTGAAATCTCATGTTGA 1848 0.4031 MLSSYTNSGRPREALSLYNNLLQSQTEQPNPFLYSSVLKACGLVKDVELGKMVHRQISEARLELDTVLMNALLDMYVKCGNLRDAKRVFHEIPFKNSTSWNTLILGHMKWGLIDDALNLFDQMPDKDVVSWNSIVAGLAENASPYGLNFVAMMHLKGFKLDEFTFPCALKACGHHGDLTMGRQIHCCIIKSGFEPCCYCTSALIDMYSNCKLLDEAVTIFHRFFRDSDVAESLTLWNSILSGYAANGDSTKALSLIVHMHHCGVYFDSYTFSIALKVCMYFPSLRLASQVHGLVITSGYELDYVVGSILIDLYAKQGNINHALRLFEKLPDKDVVAWSSLIAGCARFGLDMLALTLFMNMIHLDLEIDHFVLSIVLKVSSSLASHQSGKQIHAFILKKGYESERVITTALIDMYSKCGEIEDALALFQGLSEIDTMSWTGIIVGCAQNGRADEAINLLHKMIESGKKPNEITILGVLTACRHAGLVEEAWTIFNSIETEHGLIPCPEHYNCMVDLLGQAGRFKEALKLINDMPFKPDKTIWCSLLGACGTHKDQYLANIVAEHLLATFPEDASVYVIVSNVYATLGMWDSLSKVREAVKKVGLKGAGKSWIEISC* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0977 615 Pfam PPR repeat 1 22 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 307 333 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 99 127 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 408 428 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 201 222 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 437 465 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 68 92 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 508 532 IPR002885 -
Aev08g0977 615 Pfam PPR repeat 335 362 IPR002885 -
Aev08g0977 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 302 336 IPR002885 -
Aev08g0977 615 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 8 610 - -
Aev08g0977 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 96 130 IPR002885 -
Aev08g0977 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 232 266 IPR002885 -
Aev08g0977 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 434 468 IPR002885 -
Aev08g0977 615 Pfam E motif 551 612 IPR046848 -
Aev08g0977 615 Gene3D Tetratricopeptide repeat domain 1 144 IPR011990 GO:0005515
Aev08g0977 615 Gene3D Tetratricopeptide repeat domain 145 281 IPR011990 GO:0005515
Aev08g0977 615 Gene3D Tetratricopeptide repeat domain 452 614 IPR011990 GO:0005515
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 235 267 IPR002885 -
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 307 335 IPR002885 -
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 99 129 IPR002885 -
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 70 92 IPR002885 -
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 509 532 IPR002885 -
Aev08g0977 615 TIGRFAM PPR: pentatricopeptide repeat domain 437 470 IPR002885 -
Aev08g0977 615 Gene3D Tetratricopeptide repeat domain 282 390 IPR011990 GO:0005515
Aev08g0977 615 PANTHER BNAC03G28070D PROTEIN 8 610 - -
Aev08g0977 615 Pfam PPR repeat family 235 278 IPR002885 -
Aev08g0977 615 SUPERFAMILY TPR-like 405 572 IPR011990 GO:0005515
Aev08g0977 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 65 95 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0977 Aev-Chr8 5805168 5807015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0977 1 613 Glycoside Hydrolase AT3G49170 30.918 3.53e-98 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0977 - - gmx:100780678 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0977 08 5805168 5807015 Aev08g0977 08 5805168 5807015 ECH