Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0921 ATGCCAGCTTCCCCTTCAGAGAACCGCACCAAATGGAGGAAGCGGAAGAGGGAATCCCAAATCAGCAGGCGCCACCACAAGCACCACCACGACGACGACGAAGATGAGGAAGATGAAAACCCCAATGTCGATGAAGACCATGACGACGATTCCGAGGACCAAACCCTCAACCACCCTAATTCCCAATCTGCGCCCAATTCCCACCCTCACAACGAGATCGAGGTCCTCTCCGAACACGCCATTCAGATTTCCCACTTCCCCGCCGTCGTACAGCGCTCCGTCAACCGCCCCCACTCCTCCGTGGCCACAATCGTCGCTCTCGAGCGCGCCACCCACTCCGGTGACACCAAGGCCCACCAACACCTCTACAACAGCAACAACAATAGCCCTCCCTTTCTGGAGAATGTCTCCCATGGCCAGCTCCAGGCACTCTCCACTGTCCCCGCAGATAGCCCCGCCTTCGACCGCGACGGTGGTGCCAATTCAGCTTTCGTTATTACTCCTCCGCCTGTCTTGGAAGGCCGCGGCGTTGTTAAGCGATTTGGAAATAGGGTCCTTGTTGTGCCAATGCATTCAGATTGGTTTTCACCAGCCTCGGTGCATCGACTAGAGAGACAAGCAGTGCCTCATTTCTTTTCTGGAAAATTGCCGGATCATACTCCAGAGAGGTACATGGAGTGTAGGAACTATATTGTTGCACTATACATGGAGGACCCTACAAAGAGGATTACCGTCTCTGATTGTCAGGGATTGTTGGTTGGGGTGGATAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCAGTGGGGAATCATCAATTACTGTGCTCGGGTTCCAAGTCAAGAGCCTTGGAATGATGCCTCCTGCCTGAAGGAGGAGACAAGTGGAGAGGTCCGCGTGCCCTCAGAGTTCTTAAAATCCATAGATAGTCTGATAAAATTTGACAAGCCCAAGTGTAAGGTCAGAGCAGACGAAATTTATTCATCATTGACAATGGGCAATGCTGATGTCGTCGATCTGGACAATAGAATACGAGAGCATCTCTCTGAAAATCATTGCAACTGTTGTTCTTGTCCTCTTCCTGCTGTATACTATCAGTCACAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGGTTTGTCGTTGGACATTCAAGTGTAGATTTTATAAGGGTTGATTCATCAAGGGATTATGGTGAGATAGATGGGGATAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGACGGAAAATTGGAAAATATCAGTGTTCCAGGCATGCCTTTGTCGTCCAATGTGGCGAATAGAAATGATAGTGGGAGATCACATGGTTACTTAAATGGAGATTCTTCAGGGACTGTCCATCAAAGCAGAGATTCGGACAGTGGGTTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTCTGGTTGCCTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCCGCTTCTTGTGCCCATGCAGCTCTAGCAGTACTGTCAGAGGATAATTCTGGCAGCACATCTCAGATGGAAGCACCAGGACAAAATAATAGGGCAAATTCCGAAGGTACGCATAGTAGAGATGGTGGTCCTCGGGGTGATGGTGCAACTTCAAATAATCATAATGAGGATAAGGCAAAAGCACATGGTTCATGGGGTCAAAATGAAGGCGGAACAACCCCACTTTCTGCTGATAAAGTTAAAGAAGCAGCTAAGGCAGGCCTCTCAGCTGCAGCCATGAAAGCTAAATTGTTTGCTGATCATGAAGAACGAGAAATTCAGAGGCTATGTGCTAATATAGTGAATCATCAATTGAAACGATTGGAATTGAAGCTGAAGCAGTTTGCAGAAATAGAAACACTGTTGATGAAAGAATGCGAACATGTTGAAAGGGCCAGGCAGAGGTTTGCTGCTGAACGGTCCCGCTTTATGTCAGTTCGTCTTGGATCTGGCGGAGCCACACCTCCAGTGAATACATCAGGTGTCGGTCCTTCCATGGCCAGCAGTAATGGCAACAATAGGCAACAAATGATATCTGCTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGCAACAACCAACCAGTCCATCCACACATGTCCTTTGCCCCAAGACCTTCTATGTTTGGGTTGGGGCAAAGATTGCCCCTATCTATGATACAACAATCTCAATCAACTTCTTCAAATGCCATGTTCAATGCCCCGGGTAATGTTCAGCCCACTACCAATCATCCATTGTTGAGACCTGTTTCAGGGACTAACTCTGGTTTAGGTTAA 2403 0.4752 MPASPSENRTKWRKRKRESQISRRHHKHHHDDDEDEEDENPNVDEDHDDDSEDQTLNHPNSQSAPNSHPHNEIEVLSEHAIQISHFPAVVQRSVNRPHSSVATIVALERATHSGDTKAHQHLYNSNNNSPPFLENVSHGQLQALSTVPADSPAFDRDGGANSAFVITPPPVLEGRGVVKRFGNRVLVVPMHSDWFSPASVHRLERQAVPHFFSGKLPDHTPERYMECRNYIVALYMEDPTKRITVSDCQGLLVGVDKEDLARIVRFLDQWGIINYCARVPSQEPWNDASCLKEETSGEVRVPSEFLKSIDSLIKFDKPKCKVRADEIYSSLTMGNADVVDLDNRIREHLSENHCNCCSCPLPAVYYQSQKEVDILLCTDCFHDGRFVVGHSSVDFIRVDSSRDYGEIDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENISVPGMPLSSNVANRNDSGRSHGYLNGDSSGTVHQSRDSDSGFPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQMEAPGQNNRANSEGTHSRDGGPRGDGATSNNHNEDKAKAHGSWGQNEGGTTPLSADKVKEAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEHVERARQRFAAERSRFMSVRLGSGGATPPVNTSGVGPSMASSNGNNRQQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSTSSNAMFNAPGNVQPTTNHPLLRPVSGTNSGLG* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0921 800 PANTHER SWI/SNF COMPLEX-RELATED 63 799 - -
Aev08g0921 800 Coils Coil 628 648 - -
Aev08g0921 800 MobiDBLite consensus disorder prediction 544 566 - -
Aev08g0921 800 Pfam SWIRM domain 189 275 IPR007526 GO:0005515
Aev08g0921 800 ProSiteProfiles Zinc finger ZZ-type profile. 348 403 IPR000433 GO:0008270
Aev08g0921 800 MobiDBLite consensus disorder prediction 1 69 - -
Aev08g0921 800 MobiDBLite consensus disorder prediction 35 51 - -
Aev08g0921 800 ProSiteProfiles SANT domain profile. 407 458 IPR017884 -
Aev08g0921 800 ProSiteProfiles Myb-like domain profile. 411 454 IPR001005 -
Aev08g0921 800 ProSiteProfiles SWIRM domain profile. 186 284 IPR007526 GO:0005515
Aev08g0921 800 MobiDBLite consensus disorder prediction 544 604 - -
Aev08g0921 800 CDD SANT 411 453 IPR001005 -
Aev08g0921 800 Pfam SWIRM-associated region 1 615 688 IPR032451 -
Aev08g0921 800 MobiDBLite consensus disorder prediction 689 727 - -
Aev08g0921 800 SUPERFAMILY Homeodomain-like 185 278 IPR009057 -
Aev08g0921 800 SMART sant 408 456 IPR001005 -
Aev08g0921 800 Gene3D - 408 458 - -
Aev08g0921 800 MobiDBLite consensus disorder prediction 694 727 - -
Aev08g0921 800 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 63 799 - -
Aev08g0921 800 MobiDBLite consensus disorder prediction 471 504 - -
Aev08g0921 800 SUPERFAMILY Homeodomain-like 409 463 IPR009057 -
Aev08g0921 800 MobiDBLite consensus disorder prediction 763 800 - -
Aev08g0921 800 Pfam Myb-like DNA-binding domain 411 453 IPR001005 -
Aev08g0921 800 Gene3D - 192 279 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0921 Aev-Chr8 5452715 5456890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0921 354 450 EF-hand Containing Proteins AT3G07740 33.962 2.42e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0921 K11649 - gmx:100780440 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0921 08 5452715 5456890 Aev08g0921 08 5452715 5456890 ECH