Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0896 ATGGCTCTCCTAACACCCACTGATTTGCGGCGGATATTTGAGAAACTTGACATGAATAGCGACGGGGTTTTAAGCCTTGATGAACTCAATTGGTTGCTCCACAACATAGGGTTCCAATTAAGCTTAGATGAGCTTGAATCCCTTGTGGAAAAGAAGTGCCTCAATTTCAGTGAGTTCTTGTTCTTCTATGACTCCATATCCAAGCACCAAAACAATAATGGAGAGAGTAGTAGTAAAGAGAGCAATAATCATCATGATCACGATCATAGTCGTGATGATCATGATCATGATGAATTGGAGAACGACCTTAAGAGCACCTTCAAGGTGTTCGATTTGGATGGAGACGGATTCATCACGAGCCAAGAACTCGAGTGCGTGCTGAAGAGGCTTGGATTGTGGGATGAGAAGAGTGGGAAGGATTGTAGGAGCATGATTCGGTTCTATGACACAAATTTGGATGGCCAACTTGATTTCGAGGAGTTCAAGAACATGATGTTGCTCACCAGAGCGTGA 513 0.4347 MALLTPTDLRRIFEKLDMNSDGVLSLDELNWLLHNIGFQLSLDELESLVEKKCLNFSEFLFFYDSISKHQNNNGESSSKESNNHHDHDHSRDDHDHDELENDLKSTFKVFDLDGDGFITSQELECVLKRLGLWDEKSGKDCRSMIRFYDTNLDGQLDFEEFKNMMLLTRA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0896 170 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 169 - -
Aev08g0896 170 MobiDBLite consensus disorder prediction 72 98 - -
Aev08g0896 170 Pfam EF-hand domain pair 101 165 IPR002048 GO:0005509
Aev08g0896 170 PANTHER CALCIUM-BINDING PROTEIN CML44-RELATED 1 169 - -
Aev08g0896 170 SMART efh_1 102 130 IPR002048 GO:0005509
Aev08g0896 170 SMART efh_1 8 36 IPR002048 GO:0005509
Aev08g0896 170 SMART efh_1 140 168 IPR002048 GO:0005509
Aev08g0896 170 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Aev08g0896 170 SUPERFAMILY EF-hand 8 166 IPR011992 -
Aev08g0896 170 ProSitePatterns EF-hand calcium-binding domain. 111 123 IPR018247 -
Aev08g0896 170 Gene3D - 66 168 - -
Aev08g0896 170 ProSiteProfiles EF-hand calcium-binding domain profile. 98 133 IPR002048 GO:0005509
Aev08g0896 170 ProSiteProfiles EF-hand calcium-binding domain profile. 136 170 IPR002048 GO:0005509
Aev08g0896 170 MobiDBLite consensus disorder prediction 79 98 - -
Aev08g0896 170 Gene3D - 6 65 - -
Aev08g0896 170 Pfam EF hand 10 29 IPR002048 GO:0005509
Aev08g0896 170 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Aev08g0896 170 CDD EFh 102 165 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0896 Aev-Chr8 5293060 5293572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0896 2 166 EF-hand Containing Proteins AT1G21550 41.916 8.85e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0896 K13448 - gmx:100527117 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0896 08 5293060 5293572 Aev08g0896 08 5293060 5293572 ECH