Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0893 ATGACAACCATGAGTGCAAAACAGCAAATCGGAGAGGTACAGAGGAGGGACAAGAGAGTAGCCACAATCCTAGCCATTGGGACAGCAAATCCACCCAATTTCATCCTCCAATCTGATTACCCAGACTTTTACTTCAGGGTCACCAAAAGCGACCACATGACCGACTTAAAACACAAGTTCAACCGCATATGTAAGAACTCAATGATTGAGAAACGACATTTTCTCTACGATGAAGATTTTCTACAGCAAAACTCAAACATCAGTACCTACGGAGCTCCTTCAATGGATGCCCGTCACTCCATACTGAGAGAGGAAGTGCCTAAACTTGGCAAAGAAGCAGCATTGAAAGCCATAGCTGAATGGAACCAACCACTGTCAAAAATCACTCACCTCATCTTCTACACTACCTCATGCTTCGGCAACATTCCAAGTTCAGATTACCACCTCGCCAATCTTCTCGGCCTCGAACCAACGCTGAACCGTCTCATGATTTTCAACACCGGTTGCCAAGCAGGGGGGACCGTCCTACGTGTCGCCAAGGACATTGCAGAGAACAATGTTGCCTCGCGTGTGCTTGTCGTGTGGGTAGAAACCATGATGGCTTCATTTCATGCCCCAAATACTAATCACATGGATGTTGTTGTAGGGCAAGCCTTGTTTGGTGACGGTGCTGCTGCTGTGATCATTGGTGCAGATCCTGACCCTTCAATTGAATTTCCACTCTTCGAACTTGTTCATGCTTCACAGAACACAGTGCCTAACTCTGAGAATGTCATCCATGGAGGTCCAAAGGAAATGGGCTTGGTTTACTATTTAGGGAAAGATATCCCTAAATTTGTGTCTGAAAACATAGAAAAGTCCTTACTTGATGCATTCAGTTCGATAGGTGTGGATAGTGCTACCATTGATTGGAGTACTCTGTTCTATGCCCTGCATTCAGGTGGTCCTGCTATTCTGAGTCAGATTGAACAGAAGCTTGGGTTGCATACAGATAAGTTGAGGGCAAATTGGCACGTGTTGAACCAGTACGGAAACATGTGGGGCCCTACGGTGATATTTGTGTTGGATGAGATGAGGAAATGGTCTAAGAAGGAAGGGAAGAGCACAAGTGGTGAAGGGTTAGAGTGGGGAGTGTTAGCAGGGTTTGGTCCTGGTTTGTCATTGGAGATCATTGTACTTCGCAGTGCCTCCTACCTCTGA 1200 0.4608 MTTMSAKQQIGEVQRRDKRVATILAIGTANPPNFILQSDYPDFYFRVTKSDHMTDLKHKFNRICKNSMIEKRHFLYDEDFLQQNSNISTYGAPSMDARHSILREEVPKLGKEAALKAIAEWNQPLSKITHLIFYTTSCFGNIPSSDYHLANLLGLEPTLNRLMIFNTGCQAGGTVLRVAKDIAENNVASRVLVVWVETMMASFHAPNTNHMDVVVGQALFGDGAAAVIIGADPDPSIEFPLFELVHASQNTVPNSENVIHGGPKEMGLVYYLGKDIPKFVSENIEKSLLDAFSSIGVDSATIDWSTLFYALHSGGPAILSQIEQKLGLHTDKLRANWHVLNQYGNMWGPTVIFVLDEMRKWSKKEGKSTSGEGLEWGVLAGFGPGLSLEIIVLRSASYL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0893 399 PIRSF PKS_III 6 397 IPR011141 GO:0009058|GO:0016747
Aev08g0893 399 Pfam Chalcone and stilbene synthases, N-terminal domain 15 233 IPR001099 -
Aev08g0893 399 SUPERFAMILY Thiolase-like 240 395 IPR016039 GO:0016746
Aev08g0893 399 Gene3D - 241 397 IPR016039 GO:0016746
Aev08g0893 399 CDD CHS_like 20 393 - -
Aev08g0893 399 PANTHER CHALCONE AND STILBENE SYNTHASE FAMILY PROTEIN 14 396 - -
Aev08g0893 399 SUPERFAMILY Thiolase-like 18 236 IPR016039 GO:0016746
Aev08g0893 399 Pfam Chalcone and stilbene synthases, C-terminal domain 243 395 IPR012328 -
Aev08g0893 399 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 14 396 IPR011141 GO:0009058|GO:0016747
Aev08g0893 399 Gene3D - 1 240 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0893 Aev-Chr8 5279111 5280519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0893 219 377 Acyl Lipid Metabolism Gene Families AT1G62640 26.923 5.60e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0893 K00660 - ahf:112706013 550.436