Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0880 ATGGCTAACAATGCAGCAGCGTGTGCTGAGAGAGCAACCAGTGACATGCTCATTGGTCCTGACTGGGCAGTTAACATTGAGTTGTGTGATATCATCAACATGGACCCCAGGCAAGCAAAGGATGCGTTAAAGATACTTAAGAAGCGTTTGAGCAGTAAAAACCCCAAGATACAACTTTTGACGCTTTTTGTACTGGAGACCCTTAGTAAAAATTGTGGTGAAAGCGTATTTCAGCAGATGGTTGAACGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCGGACTTAAATGTTAGGGAAAAGATATTGATTTTAATTGATACGTGGCAAGAAGCTTTTGGGGGCCCAACTGGAGTTTATCCTCAATACTATGCAGCATATAATGAATTAAAGTCTGCTGGAGTTGAATTTCCACCGCGAGCAGAGAACAGTGTGCCATTCTTCACTCCTCCTCAAACCCAGCCAGTTGTTCATGCTGCTGCAGAATATGATGATGATGCTGCTATTCAGGCTTCTCTTCATTCAGATGAATCTGGGCTTAGTTTACCAGAGATGCAAAATGCTCAAGGACTATCTGATGTACTGATGGAGATGCTTAGTGCCTTGAATCCTAAAGACTCCAAGGGTGTGAAGGATGAAGTAATTGTCGACCTTGTTGACCAGTGCCGTTCTTATCAAAGGCGTGTGATGCTTCTTGTGAACAATACCACGGATGAGCAGCTTTTAAGTCAGGGATTGACACTGAATGACACGCTTCAGCGAGTACTCCGTAAGCATGATGATATTGCGAATGGAACTGCTGATACAGCTGCAAGAGGAACAGAAACTTCAGCCCTGCCATTTGTAAACGTAAACCATGAGGATGATGAGTCAGATGATGATTTTGCTCAACTAGCCCACAGGTCATCACGTGATAATAATTCACAGAAGCAGAAATCAGCCTATGACAAGGCAGAACCAGCAACGAGAAACTCATTTATTCCCCCACCACCATCATCAAGGAATCCAGTCTACTCTGACACTGGCATGGTTGACTACCTCAGTGGTGATGCATATAAAGCAGAAGAATACGCTAAAAACTCGAAACAGACTTCATCTACTGAGCCTCCTCATTTGATCCCTAATCCTACCGCAACGATGAGTCCCCCACGGTCTTCCTCACCCCCTCCTCATACCATGAGTACGTCACCATATTTCAGCCAACAGCCTGTGTATGATGACCCGTCTCCCATGAAAAAATCTTCTGAACAGTTGCCTCCAGCTCAATGGGATACACAATCTACCGGAATCCTTCCGCCCCCGCCTTCAAAGCACAATCAGAGACAGCAATTTTTCGAGCAACAGGGTGGCACTCTTTCAAGCGGCGGATCCAGTTCCTCGTATGACAGCTTGGTGGGACAAACTCAGAATCTATCTCTGAATCCATCCACCCCAACCAAACAACAGAAGCCAGAAGATGTCCTTTTCAAAGATTTAGTTGATTTTGCAAAATCCAAAACCTCTTCGTCTTCCAAACCGAATAATAGGTCATATTGA 1545 0.444 MANNAAACAERATSDMLIGPDWAVNIELCDIINMDPRQAKDALKILKKRLSSKNPKIQLLTLFVLETLSKNCGESVFQQMVERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELKSAGVEFPPRAENSVPFFTPPQTQPVVHAAAEYDDDAAIQASLHSDESGLSLPEMQNAQGLSDVLMEMLSALNPKDSKGVKDEVIVDLVDQCRSYQRRVMLLVNNTTDEQLLSQGLTLNDTLQRVLRKHDDIANGTADTAARGTETSALPFVNVNHEDDESDDDFAQLAHRSSRDNNSQKQKSAYDKAEPATRNSFIPPPPSSRNPVYSDTGMVDYLSGDAYKAEEYAKNSKQTSSTEPPHLIPNPTATMSPPRSSSPPPHTMSTSPYFSQQPVYDDPSPMKKSSEQLPPAQWDTQSTGILPPPPSKHNQRQQFFEQQGGTLSSGGSSSSYDSLVGQTQNLSLNPSTPTKQQKPEDVLFKDLVDFAKSKTSSSSKPNNRSY* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0880 514 SUPERFAMILY GAT-like domain 145 268 - -
Aev08g0880 514 MobiDBLite consensus disorder prediction 303 345 - -
Aev08g0880 514 MobiDBLite consensus disorder prediction 361 377 - -
Aev08g0880 514 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Aev08g0880 514 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Aev08g0880 514 CDD VHS 10 135 - -
Aev08g0880 514 PANTHER TOM1-LIKE PROTEIN 1 513 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aev08g0880 514 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Aev08g0880 514 MobiDBLite consensus disorder prediction 418 486 - -
Aev08g0880 514 PANTHER TOM1-LIKE PROTEIN 4 1 513 - -
Aev08g0880 514 Gene3D - 174 275 IPR038425 -
Aev08g0880 514 MobiDBLite consensus disorder prediction 378 393 - -
Aev08g0880 514 Gene3D - 2 158 IPR008942 -
Aev08g0880 514 Pfam GAT domain 196 267 IPR004152 GO:0035091|GO:0043130
Aev08g0880 514 ProSiteProfiles GAT domain profile. 179 267 IPR004152 GO:0035091|GO:0043130
Aev08g0880 514 MobiDBLite consensus disorder prediction 360 489 - -
Aev08g0880 514 PIRSF TOM1 1 514 IPR014645 -
Aev08g0880 514 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0880 Aev-Chr8 5204929 5208848 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0880 - - gmx:100792343 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0880 08 5204929 5208848 Aev08g0880 08 5204929 5208848 ECH