Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0876 ATGACTGCTTCAGCCTCGTTTTTGGGAAGATTGTTAAGTCGTAGGATTCACAAAACCCAACAACCATACTTATTAGGATCACCTCTTCATTATCATCTTAATAATCTTCACACCTCCTCCTCTTCTTCTTCCTCTTTTCATTCTGTGATGAAGAATAGGCGACCAACATATGCATTACCCCCAAATCTTTATCATTATAATTCTTCTACTTCAACATCAGCTACTAACCTTTTCCGCTTCTCTCGCTTTGAATCCACCAAAGCTGAGGCAGCAGCTCAATTGGAGTTGCAGGACTATCTCCCCGATGACGATGATGTTGATAACCAGACCATTGATTTTCCTGGTGGGAAAGTTGCATTCACTCCTGAAATGAGATTCATTTCTGAGTCTGCTCAGAAAAGGGTGCCTTGTTATAGAGTTCTTGATGATGATGGAGAGCCCATGAAATTCAGCAATTATGTACAGGTCAGCAAGGAAATGGCTGTGAAGATGCACTGTGACATGGTCACTCTTCAAACCATGGACAGCATATTCTATGAAGTGCAAAGGCAAGGAAGAATTTCATTCTACCTCACCTCAATGGGTGAAGAAGCTGTTAGCATTGCATCTGCAGCTGCACTTTCTTCTGATGATATTGTATTGCCTCAGTACCGGGAGCCTGGAGTTCTATTGTGGCGTGGTTTTACACTGCAACAATTTGCACACCAATTGTTTGGAAGCACAAGTGATCTTGGAAAAGGCAGGCAGATGCCTATCCACTACGGGTCAAACAAGCACAATTACATCACAGTGTCATCCCCCATTGCAACACAAATTCCTCAAGCTGTGGGCGCTGCTTATTCACTTAAAATGGATGGCAAGAATGCATGTGCAGTCACTTATTTTGGGGATGGTAGCACCAGTGAGGGTGATTTCCATGCTGGTTTGAACTTTGCAGCCGTAATGGATGCGCCTGTTATTTTTATCTGTCGTAACAATGGATGGGCAATCAGTACCCCTGTTGAAGAACAATTTCGAAGTGATGGAATTGTAGTCAAAGGGCAAGCTTATGGAATCCGGAGTATCAGAGTAGATGGAAATGATGCTCTTGCTGTATATAGTGCAGTTCAGGCTGCTCGTGAAATGGCTATAAGAGAAAAAAGACCAGTTCTGATTGAGGCTCTCACTTATAGAGTAGGACACCACTCTACATCAGATGATTCTACCAAGTACCGACCAACTGATGAGATTGAATATTGGAAAATGGAAAGGAACCCTGTAAATAGATTCAAAAGATGGGTAGAAAGGAATGGTTGGTGGAATGACAAGGATGAATTGGAGCTTAGAAGCAGTGTAAGAAAGCAGTTAATGGAAGCTATTCAGGTGGCAGAGAAGGCACAAAAACCTCCTCTTGAGGACTTGTTCAATGATGTCTATCACCAACTGTCATCAAACCTTAAAGAGCAGGACACACTACTTAGAGAAACTGTCAAGAAGCATCCTGAAGACTACCCTTCTGATGTTCCTTTGTAG 1512 0.4253 MTASASFLGRLLSRRIHKTQQPYLLGSPLHYHLNNLHTSSSSSSSFHSVMKNRRPTYALPPNLYHYNSSTSTSATNLFRFSRFESTKAEAAAQLELQDYLPDDDDVDNQTIDFPGGKVAFTPEMRFISESAQKRVPCYRVLDDDGEPMKFSNYVQVSKEMAVKMHCDMVTLQTMDSIFYEVQRQGRISFYLTSMGEEAVSIASAAALSSDDIVLPQYREPGVLLWRGFTLQQFAHQLFGSTSDLGKGRQMPIHYGSNKHNYITVSSPIATQIPQAVGAAYSLKMDGKNACAVTYFGDGSTSEGDFHAGLNFAAVMDAPVIFICRNNGWAISTPVEEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVQAAREMAIREKRPVLIEALTYRVGHHSTSDDSTKYRPTDEIEYWKMERNPVNRFKRWVERNGWWNDKDELELRSSVRKQLMEAIQVAEKAQKPPLEDLFNDVYHQLSSNLKEQDTLLRETVKKHPEDYPSDVPL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0876 503 Pfam Dehydrogenase E1 component 168 463 IPR001017 GO:0016624
Aev08g0876 503 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 79 503 - -
Aev08g0876 503 CDD TPP_E1_PDC_ADC_BCADC 164 456 - -
Aev08g0876 503 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 79 503 - -
Aev08g0876 503 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 135 498 IPR029061 -
Aev08g0876 503 Gene3D - 106 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0876 Aev-Chr8 5181814 5186043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0876 57 340 Acyl Lipid Metabolism Gene Families AT1G21400 65.141 3.86e-134 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0876 K00166 - gmx:100796766 711.835