Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0875 ATGGCTACATTTCGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATGAATCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGATTGTACACTTATCAAGGTTGATAGTGTTAACAAACCTGGAATCCTGCTGGAAGTTGTGCAGATCTTGACAGATCTTGACTTTGTAATTACCAAAGCGTACATATCTTCTGATGGAGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGGAAGAAGATAACAGATAGCAAAACCATTGACTTAATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCAAAGAAGTGGTGAAGAATTGGCCAGGGAAACGTGTCGGTGTGCATTCTGTTGGCGATCATACAGCCATCGAACTCATTGGCAGAGACAGGCCAGGTCTCTTGTCTGAGATCTCAGCTGTCCTCGCCAGCCTCCACTATAACGTGGTCGCAGCGGAAGTTTGGACTCATAACAGACGGATCGCTTGTGTCCTCTATGTCAATGATGCAACAAGCCAAGCTGTGGATGATCCAAACAGATTGTCTCTCATGGAGGAGCAGCTCAACAACATCTTGCGCGGATGCGAGGACGATGACAAAGTTGCTAGGACCAGCTTCTCCATGGGCTTCACGCATATGGATAGGCGGCTCCACCAAATGTTGTTTGCTGATAGGGATTATGAACGTTCTGGAGCAACAACAGATTCTGATGATAATCCTCCTTCCTTTAGGCCAAAGATCACAATAGAACGTTGTGAGGAGAAAGGGTACTCAGTGGTTAGTGTCAGGTGCAAAGATCGGGCAAAACTCATGTTTGACATCGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAATCTCATCAGATGCACCTTATGCAACCCAGGAGTACTTTATCCGCCACATGGATGGGTGCACACTTGATACCGAGGGAGAAAAAGAAAGAGTCATCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTATGCGAGGGTGTGACCCTTGAGCTGTGTGCAAAGGATAGAGTTGGGTTGTTGTCTGAAGTGACGCGGATTCTGCGAGAGAACGGCTTAACGGTGTGCAGGGCAGGCGTATCCACAAGAGGGGAGCAAGCACTGAATGTGTTCTATGTGAGGGATGCATCCGGGAACCCTGTGGACATGAAGACTATAGAGTCACTTCGTAAAGAGATTGGGAAAACAATGGTTGTTGATGTGAAGAGGGTGCCGGGGAATGCCAAAGCACCAGCAGCAGAGAGCAGAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTTGAAAGGTTCTTGACTTAG 1350 0.463 MATFRWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFVITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSQSKEVVKNWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLHYNVVAAEVWTHNRRIACVLYVNDATSQAVDDPNRLSLMEEQLNNILRGCEDDDKVARTSFSMGFTHMDRRLHQMLFADRDYERSGATTDSDDNPPSFRPKITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYATQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVCEGVTLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTIESLRKEIGKTMVVDVKRVPGNAKAPAAESRGWAKTSFFFGNLFERFLT* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0875 449 SUPERFAMILY ACT-like 341 411 IPR045865 -
Aev08g0875 449 SUPERFAMILY ACT-like 32 108 IPR045865 -
Aev08g0875 449 CDD ACT_ACR_4 342 413 - -
Aev08g0875 449 Gene3D - 128 209 - -
Aev08g0875 449 CDD ACT_ACR_2 129 201 - -
Aev08g0875 449 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Aev08g0875 449 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Aev08g0875 449 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 449 IPR040217 -
Aev08g0875 449 Gene3D - 341 419 - -
Aev08g0875 449 CDD ACT_ACR_3 264 338 - -
Aev08g0875 449 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Aev08g0875 449 SUPERFAMILY ACT-like 125 201 IPR045865 -
Aev08g0875 449 Pfam ACT domain 37 85 IPR002912 -
Aev08g0875 449 Pfam ACT domain 130 199 IPR002912 -
Aev08g0875 449 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 449 - -
Aev08g0875 449 CDD ACT_ACR_1 35 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0875 Aev-Chr8 5172007 5175544 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0875 - - adu:107460610 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0875 08 5172007 5175544 Aev08g0875 08 5172007 5175544 ECH