Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0874 ATGGTTGGCAAGGAGAATCTGAGGACTGAGGAATTGAACTTGTGCTTTGAGAAGCTTATGATGGTTGCTGGTGGCGGTGGTGATAGTCAGAAAGGAGGGAAGATGAAAGCTGGGGGGATCAATGAGTGGAAGGACATCCCTGTGGAGCTCTTGATGCAGATTCTGTCTCTTGTCGATGATCAGACTGTGATCATAGCTTCTGGAGTTTGCCGTGGATGGAGAGATGCAATTTACTTTGGCCTTGCTCGTTTATCACTCTCATGGTGTAACAAAAACATGAACAACTTGGTTCTGTCTCTTGTTCCAAAATTCGCAAAATTGCAAACTCTAATCCTTCGTCAAGACAAGCCTCAGCTAGAGGATAATGCTGTTGAGACTATTGCAAATAGCTGTCATGAGCTGCAGATCCTGGACCTGAGTAAAAGCTTCAAACTCACTGACCGGTCTCTTTATGCCATAGCCCACGGTTGTTCCGAACTAACAAAACTTAACATCAGTGGATGTTCAGCTTTCAGTGACAATGCTCTGGCCTACCTTGCCAGTTTCTGCAGAAAACTGAAAGTTCTAAACCTCTGCGGATGCGTTAGAGCAGCAACTGATACTGCATTACAGGCTATTGGACATTACTGCAATCAGTTACAGTCTCTAAACCTAGGCTGGTGTGACAATGTTGGTGATGTTGGAGTGATGAGTTTAGCTTATGGCTGCCCTGATCTTAGAACAGTTGACTTGTGTGGCTGTGTCCTTATAACAGATGATAGTGTTATTGCTTTGGCGAGTGGATGCCCACGGCTGAGGTCCCTAGGACTGTACTACTGCAAGAACATCACAGACAGGGCAATGTACTCATTGGCACAAAGCAAAGTGAATAGGATGTGGGGATCAGTGAAAGGAGGGAATGATGAGGAGGGACTAAGGACACTGAACATAAGCCAATGCACAGCACTCACCCCTTCTGCGGTTCAGGCAGTGTGTGACTCATTCCCTTCACTCCACACATGCTCAGGTAGGCATTCACTCATCATGAGTGGCTGCCTCAACTTGACCTCTGTGCATTGTGCCTGTGCTGTCCATGCACACCGTGCAATCACCACTTTCACTCATCCAGCTCATTGA 1116 0.4659 MVGKENLRTEELNLCFEKLMMVAGGGGDSQKGGKMKAGGINEWKDIPVELLMQILSLVDDQTVIIASGVCRGWRDAIYFGLARLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLEDNAVETIANSCHELQILDLSKSFKLTDRSLYAIAHGCSELTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAATDTALQAIGHYCNQLQSLNLGWCDNVGDVGVMSLAYGCPDLRTVDLCGCVLITDDSVIALASGCPRLRSLGLYYCKNITDRAMYSLAQSKVNRMWGSVKGGNDEEGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHRAITTFTHPAH* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0874 371 SMART LRR_CC_2 104 130 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 302 327 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 157 182 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 262 287 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 131 156 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 183 209 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 210 235 IPR006553 -
Aev08g0874 371 SMART LRR_CC_2 236 261 IPR006553 -
Aev08g0874 371 PANTHER UNCHARACTERIZED 1 353 - -
Aev08g0874 371 Gene3D Ribonuclease Inhibitor 82 297 IPR032675 -
Aev08g0874 371 SUPERFAMILY RNI-like 81 285 - -
Aev08g0874 371 SUPERFAMILY F-box domain 40 79 IPR036047 GO:0005515
Aev08g0874 371 Pfam Leucine Rich repeat 210 233 IPR001611 GO:0005515
Aev08g0874 371 Pfam Leucine Rich repeat 236 259 IPR001611 GO:0005515
Aev08g0874 371 Pfam F-box domain 43 77 IPR001810 GO:0005515
Aev08g0874 371 Gene3D - 41 81 - -
Aev08g0874 371 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 353 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0874 K03875 - gmx:100797840 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0874 08 5162096 5164086 Aev08g0874 08 5162096 5164086 ECH