Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0861 ATGAGCCACCGCGGAGGAATGGACGACGATGACGACGAGGAGTACGAGGACGAGCAGGTCGCCGACTTCGACGACGACGCCGAGGCCGACGCCGCGGAAGAGGAGGAAGAGGAGGAGGATAACAGGGGCCGTGGCGGCGGCAGGAAGCGGAGGCGATCTGGTTTTATTGACGACGACGCTGAGGAGGTTGACGAAGATGAGGAGGATGATTACGAAGACGATGAAGACTTCGACGGCCGAGGGCGCCGCAGGCCCCCTCACAAGAAGGTTTCCGCCTCAAATTTCTTCGATGAGGAAGCGGTGGTCGATTCTGACGAAGAAGAGGAAGAGGAGGAAGGCGAGGATGACTTTATTGATGAGGGTGGAGCTGATCTACATGAGGAAGACGACGGGAGAAGGATGCGTGATAGGCATTTCCTGCGACACGACCAGGAAGACCAGGAAGATCTCGAAGCAGTTGCAAGGAAGATTCAGGAACGATACGGAAGGCAGCGTGGAGCAGATTTTGAAGAAGAAGCTACAGATGTGGAACAGCAAGCTCTTCTTCCATCTGTTAGGGATCCAAAGCTGTGGATGGTGAAATGTGCGATTGGTCGTGAACGAGAAACAGCTGTTTGCCTCATGCAAAAGTATATAGATAAGAAGTCTGAGTTGCAAATCAGGTCAGCTATTGCTCTTGATCATCTCAAGAACTATATATACGTGGAAGCTGATAAAGAAGCCCATGTGAGAGAGGCTTGCAAAGGTCTACGCAACATATATGCCCAAAAGATAACGCTCGTTCCAATCAGAGAAATGACTGATGTTCTGTCAGTTGAAAGCAAAGCTATTGATCTTGCTAGAGATACTTGGGTCAGAATGAAGATTGGGACATATAAAGGGGACCTTGCTAAAGTAGTGGATGTTGATAATGTGCGGCAGAGGGTTACTGTGAAACTGATTCCAAGGATAGATTTACAAGCCCTTGCGAACAAATTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCATTTGTTCCTCCTCCTCGTTTTTTTAATGTCGATGAGGCTAGGGAACTGCATATTCGTGTAGAGCATAGACGTGATGCCTATGGGGAACGATTTGATGCAATTGGGGGAATGATGTTCAAGGATGGATTTCTATACAAAACTGTATCAGTAAAATCCATTAGTTCTCAGAACATCAAACCTACGTTAAATGAGCTTGAGAAATTTCGTAAACCTGGTGAGAGTGGTGATGGTGATGTAGCTAGTCTGTCAACTCTGTTTGCAAACAGAAAGAAAGGGCATTTTATGAAAGGTGATGCTGTTATTGTTGTCAAGGGTGATTTGAAGAACTTGAAGGGGTGGGTGGAGAAAGTTGATGAAGAAAATGTTCACATAAGACCAGAAATTAAGGGTCTTCCAAAAACCCTTGCTGTAAATGAAAGGGAACTTTGTAAATACTTCGAACCTGGAAACCATGTTAAGGTTGTTTCTGGTGCCCAAGAGGGTGCTACTGGCATGGTTGTGAAGGTGGAGCAGCATGTACTGATTTTAATATCTGATACAACAAAAGAACATATCCGTGTTTTTGCAGATGATGTTGTGGAGAGCTCTGAAGTAACCACTGGAATTACAAAAATTGGAGATTATGAACTTCGTGATCTTGTTTTGCTTGATAATATGAGCTTTGGTGTGATAATTCGTGTAGAAAGTGAGGCATTTCAGGTTCTTAAGGGGGTTGCTGACAGGCCTGAAGTTGCGCTTGTTAAATTAAGAGAGATCAAATGTAAGATAGAAAAGAAAATAAGTGTGCAGGATAGGTTTAAAAATACAGTTTCATCAAAGGACGTTGTGCGGATAGTTGAGGGACCTTGCAAAGGTAAACAAGGTCCAGTGGAACACATATACAGGGGTGTCTTGTTCATCTTTGATCGACATCATCTTGAACACGCAGGCTTTATATGTGCCAAGGCCCAATCATGTGTAGTCGTGGGAGGTTCACGCTCCAGTGGTGACAGAAGTGGTGATGCCTACTCAAGATTTCCTGGCCTCAGAACTCCACCACGTGTTCCACAGTCCCCAAGGAGGTTTTCAAGAGGAGGGCCTCCAATTGATTCTGGAGGGAGGCATAGGGGTGGAAGGGGGCATGATGGTTTGGCTGGTACAACAGTTAAAGTGCGCCAGGGTCCCTATAAAGGCTACCGTGGACGTGTTATAGAAGTTAAAGGCACATCAGTTCGGGTTGAATTGGAGTCCCAGATGAAGGTTGTGACAGTTGATCGCAACCATATATCTGACAACGTAGCTGTAACCCCATATCGTGAAACTCGATATGGGATGGGAAGTGAAACCCCAATGCATCCTTCTCGAACACCCTTGCATCCATATATGACTCCTATGAGAGATCCTGGAGCAACTCCTATTCATGATGGAATGCGGACACCTATGCGTGACCGAGCATGGAATCCTTATACACCAATGAGTCCTCCAAGGGAATACGAAGATGGAAATCCAGCCTCTTGGGGAGCCAGCCCTCAGTACCAGCCAGGAAGCCCTCCATCACGGCCATACGAAGCCCCAACTCCTGGTGCTGGTTGGGCTAGCACTCCTGGTGGTAATTATAGTGATGCTGGGACACCGCGGGACAGCTCTCCCTACACTAATGCTCCAAGCCCATATTTGCCTTCAACACCTGGTGGCCAGCCTATGACACCAAATTCAGCTGCATATCTTCCTGGCACCCCTGGAGGACAGCCTATGACTCCAGGGACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGGGAAAACGAAGGGCCATGGTTTATTCCGGACATATTAGTCAATGTGCACAGGCCTGGAGAAGAATCTGTTGGAGTAATAAGAGAGGTTCTTGCGGATGGCTCTTGCAGGGTTGCTCTTGGGTCTAACGGGAATGGCGAAACCATAACAGCCCTTCCTAATGAAATGGAGGCTGTGGTGCCAAGGAAATCGGACAAAATAAAGATCATGGGTGGAGCATTGCGAGGTGCCACGGGCAAGTTGATCGGTGTAGATGGTACTGATGGTATTGTAAAGGTAGACGACACTTTGGATGTGAAGATTTTAGACTTAGTTATTTTGGCAAAATTAGCTCAGCCATGA 3129 0.4692 MSHRGGMDDDDDEEYEDEQVADFDDDAEADAAEEEEEEEDNRGRGGGRKRRRSGFIDDDAEEVDEDEEDDYEDDEDFDGRGRRRPPHKKVSASNFFDEEAVVDSDEEEEEEEGEDDFIDEGGADLHEEDDGRRMRDRHFLRHDQEDQEDLEAVARKIQERYGRQRGADFEEEATDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKKSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIYAQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFFNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSVKSISSQNIKPTLNELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVDEENVHIRPEIKGLPKTLAVNERELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNMSFGVIIRVESEAFQVLKGVADRPEVALVKLREIKCKIEKKISVQDRFKNTVSSKDVVRIVEGPCKGKQGPVEHIYRGVLFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRSGDAYSRFPGLRTPPRVPQSPRRFSRGGPPIDSGGRHRGGRGHDGLAGTTVKVRQGPYKGYRGRVIEVKGTSVRVELESQMKVVTVDRNHISDNVAVTPYRETRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMRDRAWNPYTPMSPPREYEDGNPASWGASPQYQPGSPPSRPYEAPTPGAGWASTPGGNYSDAGTPRDSSPYTNAPSPYLPSTPGGQPMTPNSAAYLPGTPGGQPMTPGTGGLDMMSPVLGGENEGPWFIPDILVNVHRPGEESVGVIREVLADGSCRVALGSNGNGETITALPNEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLAQP* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0861 1042 PIRSF Spt5 1 1042 IPR017071 GO:0006357|GO:0032784
Aev08g0861 1042 Gene3D - 169 271 IPR036735 GO:0006355
Aev08g0861 1042 Pfam Early transcription elongation factor of RNA pol II, NGN section 189 270 IPR005100 -
Aev08g0861 1042 CDD KOW_Spt5_5 713 759 IPR041978 -
Aev08g0861 1042 CDD NGN_Euk 189 271 IPR039385 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 866 884 - -
Aev08g0861 1042 CDD KOW_Spt5_4 609 651 IPR041977 -
Aev08g0861 1042 Pfam KOW motif 484 509 IPR005824 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 41 58 - -
Aev08g0861 1042 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 38 1040 - -
Aev08g0861 1042 Gene3D - 698 761 IPR014722 -
Aev08g0861 1042 Coils Coil 140 160 - -
Aev08g0861 1042 SUPERFAMILY Translation proteins SH3-like domain 473 532 IPR008991 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 9 40 - -
Aev08g0861 1042 CDD KOW_Spt5_1 282 319 IPR041973 -
Aev08g0861 1042 Gene3D - 278 320 IPR014722 -
Aev08g0861 1042 SMART kow_9 989 1016 IPR005824 -
Aev08g0861 1042 SMART kow_9 711 738 IPR005824 -
Aev08g0861 1042 SMART kow_9 278 305 IPR005824 -
Aev08g0861 1042 SMART kow_9 605 632 IPR005824 -
Aev08g0861 1042 SMART kow_9 429 456 IPR005824 -
Aev08g0861 1042 SMART kow_9 481 508 IPR005824 -
Aev08g0861 1042 SUPERFAMILY Translation proteins SH3-like domain 422 460 IPR008991 -
Aev08g0861 1042 SMART nusgn_4 187 273 IPR006645 GO:0140673
Aev08g0861 1042 MobiDBLite consensus disorder prediction 1 130 - -
Aev08g0861 1042 CDD KOW_Spt5_3 481 531 IPR041976 -
Aev08g0861 1042 PANTHER SUPPRESSOR OF TY 5 38 1040 IPR039659 GO:0006357|GO:0032784
Aev08g0861 1042 MobiDBLite consensus disorder prediction 99 124 - -
Aev08g0861 1042 CDD KOW_Spt5_6 983 1040 IPR041980 -
Aev08g0861 1042 Pfam Spt5 transcription elongation factor, acidic N-terminal 95 183 IPR022581 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 59 75 - -
Aev08g0861 1042 Gene3D - 484 533 IPR014722 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 798 919 - -
Aev08g0861 1042 ProSitePatterns Ribosomal protein L24 signature. 433 450 IPR005825 GO:0003735|GO:0005840|GO:0006412
Aev08g0861 1042 Gene3D - 424 481 IPR014722 -
Aev08g0861 1042 MobiDBLite consensus disorder prediction 660 719 - -
Aev08g0861 1042 CDD KOW_Spt5_2 430 480 IPR041975 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0861 Aev-Chr8 5050488 5057048 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0861 K15172 - gmx:100801380 1718.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0861 08 5050488 5057048 Aev08g0861 08 5050488 5057048 ECH