Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0854 ATGGAAAAAATCCTTGCTGGGAGCCTCACCTGCCATTCACAGCGAAATCGAGATTCTTCTAGTCACCACAAGATGGTGCTCACGTCCTCTGCGCGTGATTACATCAACCGCATGTTGCAGGACATCTCCGGCATGAAGGTTCTCATTCTTGATTCCCAAACGGTGAGTATTGTGAGTGTTGTGTATTCACAGTCAGAGCTTCTTCAGAAGGAAGTGTTCTTAGTTGAGTTGGTCGATTCTATTTCCAAGTCGAAGGAATCAATGTCGCATCTCAAGGCCGTGTGCTTTCTTCGGCCTACAGCAGAGAACATCCAGCATTTGCGCCGCCAGCTTGCTAATCCTAGATTCGGAGAGTATCACCTATTTTTCTCCAACATATTGAAGGACACTCAGATTCACATACTTGCTGACTCAGATGAACAGGAGGTTGTCCAGCAAGTTCAGGAGTTCTATGCAGACTTTGTTGCAATTGATCCATATCATTTCACTTTGCACGTGCCTGCAAATTACATTTATATGCTCCCAGCTGTGGTAGATCCTTCAACGCTGCAACGCTTCTGTGATCGGGTAGTTGATGGTCTAGCAGCGGTCTTTTTGGCACTAAAACGGAGACCAGTAATTAGATATCAAAGGACTTCTGACGTTGCAAAAAGGATAGCCCAAGAAGCAGCTAAACTGATGTACCAACAGGAGAGTGGTCTTTTTGATTTTAGGCGAACAGAAGTTTCACCATTGTTGTTGGTGATTGACAGGAGAGATGATCCCTTAACCCCCTTGCTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTAATAGGAATCCAAGACAACAAAGTGGACTTGAAATCTGTTGATAAATTTTCAAAGGATCAGGAGGAGGTTGTGTTGTCATCAGAGCAAGATTCATTTTTCAAAGCTAACATGTATGAGAATTTTGGAGATATCGGTATGAATATCAAGCGGCTGGTTGATGAATTTCAGCAAGTGTCAAAGAGTAACCAGAACATCCAAACAATAGAGGACATGGCCAAATTTGTTGATAATTACCCTGAGTACAGAAAAATGCATGGAAATGTGTCAAAACATGTGACTTTGGTAACAGAAATGAGCAAGATCGTTGAAGAGCGAAAACTTATGTTAGTTTCACAAACAGAACAGGAGTTGGCTTGCAATGGAGGACAAGGTGCTGCTTTTGAGGCAGTGACAAATCTATTAAACAACGAGAGCATATCAGATGTGGACCGACTACGTTTGGTCATGCTATATGCTTTGCGATATGAAAAAGATAGCCCTGTTCAATTAATGCAGCTTTTCAACAAACTGGCTTCCCGATCTGCCAAGTACAAACCTGGGCTTGTCCAGTTTCTTTTGAAGCAAGCGGGTGTTGACAAGAGAACGGGTGATCTTTATGGAAATAGAGACCTAATGAATATTGCCCGTAACATGGCTCGTGGATTGAAGGGTGTTGAGAATGTGTATACCCAGCACCAGCCGCTCCTTTTCCAAACCATGGAAAGTATAGTCAAAGGACGGTTGAGAGACGTGGACTATCCATTTATTGGAAATCACTTTCAACAAGGAAGGCCTCAGGAAGTTGTCATCTTCATTGTTGGTGGGACAACGTATGAGGAGTCACGATCAGTTGCTCTACAAAATGCCAGCAATACTGGTGTTCGGTTTATACTTGGTGGCTCTTCTGTTCTTAATTCTAAGAGGTTCTTTAAGGACTTGGAAGAAGCTCAAAGGGTAGCTCGATCTAGCACCTCTATCATTTGA 1779 0.4289 MEKILAGSLTCHSQRNRDSSSHHKMVLTSSARDYINRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSKESMSHLKAVCFLRPTAENIQHLRRQLANPRFGEYHLFFSNILKDTQIHILADSDEQEVVQQVQEFYADFVAIDPYHFTLHVPANYIYMLPAVVDPSTLQRFCDRVVDGLAAVFLALKRRPVIRYQRTSDVAKRIAQEAAKLMYQQESGLFDFRRTEVSPLLLVIDRRDDPLTPLLNQWTYQAMVHELIGIQDNKVDLKSVDKFSKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVSKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERKLMLVSQTEQELACNGGQGAAFEAVTNLLNNESISDVDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGNRDLMNIARNMARGLKGVENVYTQHQPLLFQTMESIVKGRLRDVDYPFIGNHFQQGRPQEVVIFIVGGTTYEESRSVALQNASNTGVRFILGGSSVLNSKRFFKDLEEAQRVARSSTSII* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0854 592 PIRSF VPS45_Sec1 25 589 IPR001619 GO:0016192
Aev08g0854 592 Pfam Sec1 family 46 577 IPR001619 GO:0016192
Aev08g0854 592 Gene3D - 377 498 - -
Aev08g0854 592 SUPERFAMILY Sec1/munc18-like (SM) proteins 27 580 IPR036045 -
Aev08g0854 592 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 27 579 IPR001619 GO:0016192
Aev08g0854 592 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 262 375 IPR043127 -
Aev08g0854 592 Gene3D - 15 152 IPR043154 -
Aev08g0854 592 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 27 579 - -
Aev08g0854 592 Gene3D - 162 579 IPR027482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0854 Aev-Chr8 5022348 5027196 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0854 K12479 - gmx:100782786 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0854 08 5022348 5027196 Aev08g0854 08 5022348 5027196 ECH