Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0838 ATGATGGTGGGTGTGGTTTTGCGAGTCACTACTGAGTTACGAGTTTTGGCGATGGCTTCCAAGCGGATCTTGAAGGAGCTCAAGGATCTGCAGAAGGATCCTCCTACCTCTTGCAGCGCAGGTCCTGTTGCTGAAGACATGTTTCACTGGCAAGCAACAATTATGGGTCCGCCAGACAGTCCTTATGCTGGAGGTGTTTTCCTAGTCACAATTCATTTCCCTCCAGATTATCCATTCAAGCCACCCAAGGTTGCATTCAGGACGAAGGTATTTCACCCAAATATTAACAGCAATGGAAGCATTTGTCTTGACATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCGAAGGTGTTGCTCTCCATTTGCTCCCTGTTGACTGACCCAAATCCTGATGATCCTTTGGTCCCTGAAATCGCCCACATGTACAAGACAGACAGGAACAAGTACGAGACAACCGCCAGAAGCTGGACCCAGAAATATGCCATGGGCTAA 498 0.4819 MMVGVVLRVTTELRVLAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0838 165 SMART ubc_7 21 164 - -
Aev08g0838 165 CDD UBCc 20 159 IPR000608 -
Aev08g0838 165 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 18 164 IPR000608 -
Aev08g0838 165 SUPERFAMILY UBC-like 13 164 IPR016135 -
Aev08g0838 165 PANTHER BNAA01G32320D PROTEIN 20 162 - -
Aev08g0838 165 Gene3D Ubiquitin Conjugating Enzyme 11 165 IPR016135 -
Aev08g0838 165 Pfam Ubiquitin-conjugating enzyme 22 158 IPR000608 -
Aev08g0838 165 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 20 162 - -
Aev08g0838 165 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 91 106 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0838 Aev-Chr8 4933952 4938495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0838 19 131 Miscellaneous Gene Families AT3G17000 36.975 1.35e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0838 - K06689 egr:104441683 314.309