Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0820 ATGGAGGACGGCGCAGGAAGAGGTTTGGAATGCCAGAAGACTATGGATGGGAAGGGGAGTAACGGGAATGGTCTAGAGAAGGAAATTCCTTCATGTTGTTTGAAAGCTAAGGCTTCAGCCCCTGAGTCTGAAGCAAAGTGCCATTCCACTGTTGTTTCTGGGTGGTTCTCGGCATCTCAAACTTGCTCTGGGAAAGCTGGGAAAGCTCTTTATTTCAACAACCCGATGTGGCCAGGAGAAGCTCATTCCATCAAAGTAGAGAAGACACTGTTCAAGGAAAAGTCAGAGTACCAAGAGGTCTTGATTTTTGAGTCATCAGCATATGGGAAAGTGCTTGTACTTGATGGGATTGTTCAGCTGACTGAGAAAGATGAATGTGCTTACCAGGAGATGATTGCTCATCTTCCCCTTTGTTCTATTGAGTCCCCAAAAAATGTTTTAGTTGTTGGTGGAGGAGATGGTGGGGTTCTGAGGGAAGTTTCCCGTCACAGCTCTGTGGAGCATATTGATATCTGTGAGATAGATAAGATGGTTATTGATGTATCTAGAGAGTTTTTTCCAGAGTTAGCTGTTGGGTTTGATGATCCACGAGTACACCTGCATGTTGGTGATGCTGTTGATTTTCTTAAACGTGTTCCTGAAGGGAAGTATGATGCCATTATTGTTGATTCCTCGGATCCAGTTGGTCCTGCCCAGGAACTTGTAGAGAAGCCATTTTTTGAGACTATAGCTAGAGCATTAAGACCTGGTGGAGTTCTTTGCAACATGGCTGAAAGCATGTGGCTTCATACACACCTTATTCAAGATATGATGTTGATTTGTCGTGAAACATTCAAAGGTTCTGTACATTATGCATGGTCAAGTGTTCCAACATATCCAAGTGGTGTGATAGGGTTTCTTCTCTGCTCAACAGAGGGGCCACCAGTTGATTTTGTTCACCCCATCAACCCCATTGAAAAGGTGCAAGGTGCTGATAAGCACGTAAGACAACTTAGGTTCTACAACTCTGAGATGCATTCAGCTGCTTTTGCATTGCCAACATTTCTGAAGAGGGAGGTCAAGTTGCTTCGTGATTAG 1077 0.441 MEDGAGRGLECQKTMDGKGSNGNGLEKEIPSCCLKAKASAPESEAKCHSTVVSGWFSASQTCSGKAGKALYFNNPMWPGEAHSIKVEKTLFKEKSEYQEVLIFESSAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIESPKNVLVVGGGDGGVLREVSRHSSVEHIDICEIDKMVIDVSREFFPELAVGFDDPRVHLHVGDAVDFLKRVPEGKYDAIIVDSSDPVGPAQELVEKPFFETIARALRPGGVLCNMAESMWLHTHLIQDMMLICRETFKGSVHYAWSSVPTYPSGVIGFLLCSTEGPPVDFVHPINPIEKVQGADKHVRQLRFYNSEMHSAAFALPTFLKREVKLLRD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0820 358 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 53 304 IPR030374 -
Aev08g0820 358 Hamap Polyamine aminopropyltransferase [speE]. 54 354 IPR001045 GO:0003824
Aev08g0820 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 352 IPR029063 -
Aev08g0820 358 Gene3D Vaccinia Virus protein VP39 120 355 IPR029063 -
Aev08g0820 358 Pfam Spermidine synthase tetramerisation domain 75 122 IPR035246 -
Aev08g0820 358 TIGRFAM speE: spermidine synthase 79 348 IPR001045 GO:0003824
Aev08g0820 358 PIRSF Spermidine_synth 42 357 IPR030668 GO:0006595
Aev08g0820 358 PANTHER SPERMIDINE/SPERMINE SYNTHASE 1 357 IPR001045 GO:0003824
Aev08g0820 358 Pfam Spermine/spermidine synthase domain 125 309 - -
Aev08g0820 358 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 146 159 IPR030373 -
Aev08g0820 358 PANTHER SPERMINE SYNTHASE 1 357 - -
Aev08g0820 358 MobiDBLite consensus disorder prediction 1 22 - -
Aev08g0820 358 Gene3D Spermidine synthase, tetramerisation domain 46 119 IPR037163 -
Aev08g0820 358 CDD AdoMet_MTases 167 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0820 Aev-Chr8 4769238 4771828 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0820 K00797 - gmx:100815244 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0820 08 4769238 4771828 Aev08g0820 08 4769238 4771828 ECH