Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0799 ATGGGGTGCCATCATTCAAAGAGAGCCATCAAAGTACCTGCTGGTTATGAGGATCCCACTGTTCTTGCTTCTGTGACACCTTTTTCTGTGAGTGAAGTGGAGGCCTTATATGAGCTTTTCAAGAAGTTGAGCAATTCAATTTTTGAGGATGGTCTTATTCACAAGGAAGAATTCCAGCTGGCACTATTCAGGAATAAAAACAAGAGAAATCTGTTTGCAGACAGGATTTTTGATTTGTTTGACCTTAAGAGAAATGGGGTCATTGAGTTCGGGGAATTTGTTCGATCATTGGGTGTTTTTCACCCAAATGCACCTTTAGAAGACAAGATTGCATTTGCTTTTAGGTTATATGATCTGAGGCAGACAGGGTATATTGAACGGGAAGAGTTGAAGGTGATGGTATTGGCACTTCTACACGAGTCAGATCTTGTTCTTTCAGATGATATTGTTGAAACCATAGTGGACAAGACTTTTAGTGATGCTGATGCAAAAGGTGATGGGAAGATTGATCCAGAGGAGTGGAAATCATTTGTGTCTAAACATCCATCCTTAATAAAGAACATGACTCTACCATATCTAAAGGATATAACCTTAGCATTTCCCAGTTTTATTGTAAGAGCAGAAGCTGATGACTCAGAAATGTGA 645 0.3938 MGCHHSKRAIKVPAGYEDPTVLASVTPFSVSEVEALYELFKKLSNSIFEDGLIHKEEFQLALFRNKNKRNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPNAPLEDKIAFAFRLYDLRQTGYIEREELKVMVLALLHESDLVLSDDIVETIVDKTFSDADAKGDGKIDPEEWKSFVSKHPSLIKNMTLPYLKDITLAFPSFIVRAEADDSEM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0799 214 Pfam EF-hand domain pair 108 175 IPR002048 GO:0005509
Aev08g0799 214 CDD EFh 109 179 IPR002048 GO:0005509
Aev08g0799 214 Pfam EF-hand domain pair 50 95 IPR002048 GO:0005509
Aev08g0799 214 Gene3D - 18 212 - -
Aev08g0799 214 PRINTS Recoverin family signature 76 97 - -
Aev08g0799 214 PRINTS Recoverin family signature 123 141 - -
Aev08g0799 214 PRINTS Recoverin family signature 169 189 - -
Aev08g0799 214 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Aev08g0799 214 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Aev08g0799 214 SMART efh_1 72 100 IPR002048 GO:0005509
Aev08g0799 214 SMART efh_1 153 181 IPR002048 GO:0005509
Aev08g0799 214 SMART efh_1 109 137 IPR002048 GO:0005509
Aev08g0799 214 PANTHER CALCINEURIN B-LIKE PROTEIN 4 1 214 - -
Aev08g0799 214 PANTHER CALCINEURIN B 1 214 IPR045198 GO:0005509|GO:0019722|GO:0019900
Aev08g0799 214 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Aev08g0799 214 SUPERFAMILY EF-hand 21 202 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0799 Aev-Chr8 4617148 4618929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0799 26 214 EF-hand Containing Proteins AT5G24270 74.074 2.48e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0799 K06268 - pop:7496399 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0799 08 4617148 4618929 Aev08g0799 08 4617148 4618929 ECH