Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0784 ATGGAAGCTTCGTTTCTAGCTCCCTCGCCCTCCTTCACTGCGTTCAGGACAAGCAAGGAGCTTCCGCATATGTTGTCACTCTCTGACTTGAAATCCACAACGTGCTTCTCAGTTTGTAATCAAAAGCAGAACTCCAATCAAAGGCTTTACATTATACCGGTTAGGAATGTTGCTCGGTTCTGCACTTCAAGATCTTCAGTTGAGTCATTGGGATTTGGTGAGACAGGTTCACATGCTAATTCAGGTTGCTCATCTCCAAATGACTATCAGAGAATAAACAATTTAGAGAGGGAGTTGGAAGAGTTGTTTGGTGAAGTGAAAAGAATGATTAGGATGGGAAACAAAAAAGGTGCTATTGACCTGCTTAATGCAAATTATGAGGTGGTGAAAGATCGGCTCAATTCTGGCACTAAAGGCATAGAAGAAGCTGCAATTCTGGACATCTTAGCATTGGGTTATGTAGCTGTAGGAGACTTAAAGTTTGTTGGTTCTCTGTTAAATTTGATGCAAGGAGTGGTTGACAATTTGAAGGATGATGTGCCGCATCTAGCTTCAATGCTTATGCATATGGGAAGTATGTATGCAACATTGAGCAACTTTGAAAAATCATTGGACACATATCAAAGGGCTTTCTACATCATGGAGAAGACCTACGGTAGGGATAGCACTTTTCTTGTCACACCCATTTTGGCCATGGCAAAAGCTCTTGGTTCTATTGGAAAAGCAACAAAAGCCATAGAGAAATACCACCATGCAATTACTCTTTTGGAGTCAAATAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTGGTCTTGGTAATCTATTACTGAAAGAAAGAAAAGTCAATGATGCAGAACCTCATTTTACTAGGGTTTTAAACATATACACAAAGTTATATGGACAAAATGATGGAAGAATTGGAATGGCCATGAGTTCCTTAGCCCAAGTGAAGTGTGCTCAAGGGAAGTCAGATGAAGCAATTGATTTATATAAACGTGCTCTTCAGGTCATGAAAGATTCCAATTACCTTCCCCTGGATGACAGCATCATGGAGAAAATGAGGGTAGATCTAGCTGAATTACTTCATGCTGTTGGAAGAGGACAAGAAGGAAGAGAATTGTTAGAAGAGTGCTTATTGATCACTGAGAAGTACAAAGGAAAGGACCATCCAAGTTTAGTGACACACATGATAAATCTTGCAACTTCATATTCAAGGTCAAAGAGCTATCCCGAGGCTGAGCACTTGCTGAGAAGAGGGTTGGAACTCATGATAAAGCAGAAAGGAACCGATGATCAATCCATCAGCTTCCCTATGTTGCACCTTGCAGTCACACTCTACCACTTGAAACAAGATGAAGAAGCAGAGAAATTCGCCCTGCAGGCCTTGCGCATCCGCGAGAAGGCATTCGGAGAAGACTCTCTTCCTGTTGGGGAGGCTTTGGACTGTTTGGTGTCTATTCAAACCAGACTTGGTAAAGATGACAGTGAGTTGCTCAAGCTACTTAGAAGGATTCTTGACATCCAAGAGACAGAATTTGGATATGAGAGTGAGGAGGTTTTAACCACCCTCAAAAAAATTGTATTCTATTTAGATAGACTAGGCAGAAGAGATGAAATGCTTCCCTTGCAGAGAAGGTTGTCCTTGCTTAGGAAGAAGTATAAGCAGATGATCCATCACTAA 1689 0.4127 MEASFLAPSPSFTAFRTSKELPHMLSLSDLKSTTCFSVCNQKQNSNQRLYIIPVRNVARFCTSRSSVESLGFGETGSHANSGCSSPNDYQRINNLERELEELFGEVKRMIRMGNKKGAIDLLNANYEVVKDRLNSGTKGIEEAAILDILALGYVAVGDLKFVGSLLNLMQGVVDNLKDDVPHLASMLMHMGSMYATLSNFEKSLDTYQRAFYIMEKTYGRDSTFLVTPILAMAKALGSIGKATKAIEKYHHAITLLESNRGAESKDLVVPLLGLGNLLLKERKVNDAEPHFTRVLNIYTKLYGQNDGRIGMAMSSLAQVKCAQGKSDEAIDLYKRALQVMKDSNYLPLDDSIMEKMRVDLAELLHAVGRGQEGRELLEECLLITEKYKGKDHPSLVTHMINLATSYSRSKSYPEAEHLLRRGLELMIKQKGTDDQSISFPMLHLAVTLYHLKQDEEAEKFALQALRIREKAFGEDSLPVGEALDCLVSIQTRLGKDDSELLKLLRRILDIQETEFGYESEEVLTTLKKIVFYLDRLGRRDEMLPLQRRLSLLRKKYKQMIHH* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0784 562 ProSiteProfiles TPR repeat profile. 310 343 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 438 471 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 396 429 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 184 217 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 310 343 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 268 301 IPR019734 GO:0005515
Aev08g0784 562 SMART tpr_5 226 259 IPR019734 GO:0005515
Aev08g0784 562 SUPERFAMILY TPR-like 235 469 IPR011990 GO:0005515
Aev08g0784 562 SUPERFAMILY TPR-like 110 259 IPR011990 GO:0005515
Aev08g0784 562 Gene3D Tetratricopeptide repeat domain 78 351 IPR011990 GO:0005515
Aev08g0784 562 Gene3D Tetratricopeptide repeat domain 352 560 IPR011990 GO:0005515
Aev08g0784 562 Pfam Tetratricopeptide repeat 272 341 - -
Aev08g0784 562 Pfam Tetratricopeptide repeat 183 257 - -
Aev08g0784 562 Pfam Tetratricopeptide repeat 355 426 - -
Aev08g0784 562 Coils Coil 92 112 - -
Aev08g0784 562 Pfam Tetratricopeptide repeat 441 476 - -
Aev08g0784 562 ProSiteProfiles TPR repeat profile. 184 217 IPR019734 GO:0005515
Aev08g0784 562 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 96 548 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0784 - - aprc:113852595 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0784 08 4539436 4542389 Aev08g0784 08 4539436 4542389 ECH