Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0783 ATGGACAGGTCTAGATCTAAGAGGAACTACTATTACGACCAGGACTATGATTCCGATACCCTTGCTAGGACCAGGCCCAGATATAACCATCACTATGCTAACGCCCCTACGCACCGCCACCGTGGCGGAGGTGGCGGCGGGGGACGGCACCCTAAGGCGGCGCAGGACTCGCCGCCGTTGACTGTCACCACTAGCTACCGCATTCTCTGCCACGACATGAAGGCCGGTGGCGTGATCGGGAAGTCAGGCAGCATCATAAAGACCATACGTCAGCGCACCGGCGCTTGGATCAACGTGCACGAGCTGATGCCTGGAGACGAGGAGCGGATCATCGAGATTTCCGACACGCGCCGCCGTGACTCCGAGGGGAGAATGCCGTCGTTCTCGCCGGCGCAGGAGGCGCTGCTCATGATCCACGACAGGATCCTCGAGAGCGATTCGGCGTTTGGGGTAGGGGAGGAGGATGACGAGTACGGCGGTGGTGGAAGAGGTGGCGGTGGTGGGAACAACCGCGTGGCGACGAGGTTGGTGGTGTCGAGAATGCATGTAGGGTGTTTGTTGGGGAAAGGAGGGAAGATTATTGAACAAATGAGGATGGAAACAAAGACACAAATTAGGATACTTCCCAGGGATCACAATCTACCCCGTTGTGTTACCATGTCCGAAGAGATTGTTCAGGTTGTAGGTGACGTCAACGCTGTAAAAAGTGCTATAGTAATTATATCATCGCGGTTACGGGAGAGCCAGCATCGTGACCGCAGTCATTTCCATGGACGTGGACATTCACCAGAGCGTTTTTTGCCACCTGATGACGATTATATTCCTAACGCGACTGGTGGGTCCCGAAGATCTTCTGTGGATGGGCCTAATTTTGGATCACGAGGATCTGTCGCTAACGCCAGACCCAATAACCACCCCTCATTAGGTTATGGAATGGAGCCAGGGGCTGCTCCTTTGGGTGACGAAGCACAGCCTCTCTACGGAGAGGAACTTGTTTTCCGCATGCTTTGTCCAGTTGAGAAAGTTGATCGAATTATTGGGCAATCAGATGGAATTGTAGAGTTCCTTCAGAATGAAGTTGGGGTAGATGTAAAGGTCACTGATCCAATTGGTGGTTCAGATGAGCAAATAATTATCATTACTTCTGAGGAGGGTCCTGATGATGAGCTGTTTCCAGCTCAGGAAGCTTTGTTGCACATACAAACTCGAATTGTCGATCTTCTTCTAGATAACGACAATACCATAACCACCAGGCTTCTTGTCCCATCTAGCGATATTGAATGCTTAGTCGGAAAAGATGCATCACTATCAGAAATAAGGAGGTTGACTGGTGCTAATATTCAAATTCTGCCTAGGGAAGAACTACCTCTCTGTGTTGCAAAATCTGATGAGCTGGTACAGATTGTGGGAGAGATAAAAGCAGCCCGTGATGCTGTTATTGAGGTGACATCAAGATTAAGAAGTTACTTGTATAGGGACTTCTTTCAAAGAGATACATTACCACCATCAGGCCCCTTACCTGGTGTGGAGGCTTCGTCTTCTAATAATATAGCTCCAGTTCCCGAAAGTCCTGCATCTTATCAGAATATGCAAACTGTGCCTGGATCCATTCCATCGAAGGTGTTCTTTGACCCAGAATTTGGAGGATCTAGCACTGCGACTGGAAAGCAGAAAGAAAGCGACCGTCGTGATGATGTGCCTAGTGGTTTAAATAGAATTTCCGTGCCTCTTGTCACGAGAAGTACACTTGAAGTTGTTATACCGGACTATGCAGCTCCAAAGCTTATAGCAAAATCCAAAAGCAAGCTTGCACAGATAAGTGAGTTGTCAGGAGCGAACGTAACGCTTGTAGAGGATATACCAGATGTGACACAGAAGATCATTCAGATATCTGGTACACCGGAGCAGGCAGAGAGAGCACAAAGCTTACTCCAGGGATTTATTTTGAGCACACAAGAAGATGGCCCTTAA 1971 0.4916 MDRSRSKRNYYYDQDYDSDTLARTRPRYNHHYANAPTHRHRGGGGGGGRHPKAAQDSPPLTVTTSYRILCHDMKAGGVIGKSGSIIKTIRQRTGAWINVHELMPGDEERIIEISDTRRRDSEGRMPSFSPAQEALLMIHDRILESDSAFGVGEEDDEYGGGGRGGGGGNNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVTMSEEIVQVVGDVNAVKSAIVIISSRLRESQHRDRSHFHGRGHSPERFLPPDDDYIPNATGGSRRSSVDGPNFGSRGSVANARPNNHPSLGYGMEPGAAPLGDEAQPLYGEELVFRMLCPVEKVDRIIGQSDGIVEFLQNEVGVDVKVTDPIGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDLLLDNDNTITTRLLVPSSDIECLVGKDASLSEIRRLTGANIQILPREELPLCVAKSDELVQIVGEIKAARDAVIEVTSRLRSYLYRDFFQRDTLPPSGPLPGVEASSSNNIAPVPESPASYQNMQTVPGSIPSKVFFDPEFGGSSTATGKQKESDRRDDVPSGLNRISVPLVTRSTLEVVIPDYAAPKLIAKSKSKLAQISELSGANVTLVEDIPDVTQKIIQISGTPEQAERAQSLLQGFILSTQEDGP* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0783 656 MobiDBLite consensus disorder prediction 32 60 - -
Aev08g0783 656 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 323 388 IPR036612 GO:0003723
Aev08g0783 656 ProSiteProfiles Type-1 KH domain profile. 63 135 - -
Aev08g0783 656 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 581 652 IPR036612 GO:0003723
Aev08g0783 656 CDD KH-I 582 645 - -
Aev08g0783 656 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 3 539 - -
Aev08g0783 656 Gene3D K Homology domain, type 1 171 250 IPR036612 GO:0003723
Aev08g0783 656 Gene3D K Homology domain, type 1 579 651 IPR036612 GO:0003723
Aev08g0783 656 SMART kh_6 170 246 IPR004087 GO:0003676
Aev08g0783 656 SMART kh_6 62 143 IPR004087 GO:0003676
Aev08g0783 656 SMART kh_6 329 402 IPR004087 GO:0003676
Aev08g0783 656 SMART kh_6 413 487 IPR004087 GO:0003676
Aev08g0783 656 SMART kh_6 579 649 IPR004087 GO:0003676
Aev08g0783 656 MobiDBLite consensus disorder prediction 278 301 - -
Aev08g0783 656 ProSiteProfiles Type-1 KH domain profile. 171 241 - -
Aev08g0783 656 ProSiteProfiles Type-1 KH domain profile. 580 644 - -
Aev08g0783 656 MobiDBLite consensus disorder prediction 548 570 - -
Aev08g0783 656 Pfam KH domain 582 645 IPR004088 GO:0003723
Aev08g0783 656 Pfam KH domain 416 480 IPR004088 GO:0003723
Aev08g0783 656 Pfam KH domain 66 114 IPR004088 GO:0003723
Aev08g0783 656 Pfam KH domain 333 385 IPR004088 GO:0003723
Aev08g0783 656 Pfam KH domain 174 242 IPR004088 GO:0003723
Aev08g0783 656 MobiDBLite consensus disorder prediction 249 301 - -
Aev08g0783 656 MobiDBLite consensus disorder prediction 502 531 - -
Aev08g0783 656 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3 3 539 - -
Aev08g0783 656 MobiDBLite consensus disorder prediction 508 531 - -
Aev08g0783 656 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 61 114 IPR036612 GO:0003723
Aev08g0783 656 ProSiteProfiles Type-1 KH domain profile. 330 397 - -
Aev08g0783 656 ProSiteProfiles Type-1 KH domain profile. 414 486 - -
Aev08g0783 656 CDD PCBP_like_KH 65 139 - -
Aev08g0783 656 Gene3D - 329 490 - -
Aev08g0783 656 Gene3D K Homology domain, type 1 61 170 IPR036612 GO:0003723
Aev08g0783 656 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 162 252 IPR036612 GO:0003723
Aev08g0783 656 CDD PCBP_like_KH 175 242 - -
Aev08g0783 656 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 407 494 IPR036612 GO:0003723
Aev08g0783 656 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0783 Aev-Chr8 4533893 4538390 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0783 K21444 - gmx:100804167 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0783 08 4533893 4538390 Aev08g0783 08 4533893 4538390 ECH