Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0593 ATGGAGGGAGCTCTCAGTCTCAGTCTCACTCCTCTCTCGCCGCTGAACATGAACTCTGCAATTGCAAACAGCATCGATTTGCTTCAGTTCCCAAAACCCTTCTTCCCTCCTAAAACCCTCTTCACCCATCTTCCCCGTTCTTTAAAACCTCGCTCCACTCTTTCCCAACGCATTCTCAGAACTTCATTCTCTCATAAATCCATCACTCTTCGGAAACGCACAGTAACAGCTTCCAATGCTTCCGGTGCTGCTTCAAGTTCTCTTTCAAACACTACGGCTTCCAACCAAGAAGAGCAGCAAGAAGATGCTGAGTCAGCTCAGCTATTCGAGAAACTGAAGGAGGCTGAAAAGAAACGGATGAATGAGTTGGAAGAGTTTGAGAGAAAGGCCAACGTGCAGTTAGAGAGGCAGCTTGTGTTGGCTTCAGAGTGGAGCAGATCCTTGTTGACGTTGCGTGGAAAATTGAAGGGAACAGAGTGTGATCCTGAAAACTCACACAGGATAGACTTCAGCGAGTTTATGAGACTTCTTGACTCTAACAATGTCCAGTTTATGGAGTACTCCAATTATGGTCAAACAATATCAGTGATTCTACCTTATTACAAAGATGGGAAAACATCAGGGACTGATAAGGATATTGTTTTTCGGCGTCATGTGGTTGATCGAATGCCAATTGATTGTTGGAATGATGTTTGGAGAAAGCTGCATCAGCAAATTGTAAATGTTGATGTCATCAATGTTGACACTGTACCTGCTGAGGTATACTCAACTGTTGCAACTGCCGTCATATGGTCAATGCGTCTTGCCCTAGCTGTTGGATTTTATGTTTGGATTGACAATATGATGAGACCAATATATGCAAAGTTGATACCTTGCGATTTGGGAACTCCTATGCAACAAACTAGGCAGCCAATCAAACGCCAAGCACTTGGATCTCTTGGCAAGAGCCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTTACATTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAATTGCAAGAGATTGTCCGCATTTTAAAGAATGATGAGGAGTTTCAAGACAAAGGAATTTATTGTCCAAAAGGAGTGCTTCTTCATGGGCCTCCAGGAACTGGCAAAACTCTACTGGCTAAAGCCATTGCTGGTGAAGCAGGATTGCCTTTTTTTGCAGCGAATGGCACAGATTTTGTAGAGATGTTTGTAGGGGTTGCTGCGTCACGTGTTAAAGATCTTTTTGCTAATGCAAGATCATATTCTCCTTCTATTATCTTCATTGATGAGATAGATGCTATAGGTAGCAAGCGTGGAGGACCTGATATTGGCGGAGGAGGTGCTGAAAGGGAACAGGGTTTGCTGCAGATACTGACAGAAATGGATGGATTCAAAGTTTCTACTGCACAAGTGCTTGTGATAGGTGCCACAAATAGATTGGATATTCTTGATCCTGCTCTATTGAGGAAGGGTCGTTTTGACAAGATCGTTCGAGTTGGTCTGCCATCAAAAGATGGAAGATTTGCCATTTTGAAGGTGCATGCTAGGAACAAATATTTTCGTTCAGAGGAGGAAAAGGATATTCTTCTCAAGGAAATTGCAGAGCTTTCGGAAGATTTCACTGGCGCAGAGCTACAAAATATACTGAATGAAGCTGGAATTTTGACAGCCCGGAAGGATTTGGATTACATAGGGCGAGATGAACTGCTTGAAGCATTAAAAAGGCAAAAAGGAACTTTTGAAACAGGGCAAGAAGATAGTGCTGAAATCCCAGAAGAATTGAAACTGAGACTGGCTTACAGAGAAGCTGCTGTTGCTGTTCTTGCATGTTATTATCCTGAACCACACCGCCCTTTTGTTGAGACTGATATAAATTCTATTCGCAGCCAACCAAATATGAGTTATACTGAGGTTGCTGGCCAGGTTTTTGCAAGGAAATCGGATTATGTAAACTCTATAATCCGTGCTTGTGCTCCAAGAGTAATTGAGGAAGAGATGTTTGGTATTGACAACTTATGTTGGATCTCTGCAAAGGCTACATTAGAAGCTTCAAGGCACGCAGAATTTTTAATTCTACAGACAGGAATGACTGCATTTGGGAAAGCATACTTCAAAAACCAAAGTGATCTTGTGCCTAACCTTGCACTGAAGCTTGAAGCACTTCGAGATGAGTATATGCGTTATGCAACAGAGAAGTGTGCATCTGTGCTAAAGGAACATTATTCAGCAGTTGAGACAATAACAGATATTTTGCTTGAGAAGGGTCAGATCAATGCTGAGGAGATTTGGGAAATTTATAAGAGTTCTCCTCGTGTAGCTCAGCCTCCTGTGAGCCCAGTTGATGAATACGGAGCACTGATTTATGCTGGACGATGGGGAATCCATGGTGCCAGTCTTCCAGGAAGGGTTACATTTGCACCGGGAAACGTTGGATTTTCGACCTTCGGTGCTCCTCGCCCGACAGTGACGCAAGTTGTTAGTGATGAAACTTGGAAACTAGTAGATGATATCTGGGATAAAAAGCCAATCAGCCTTGTGAATGGAGATGCAACCTTGATCAAGAGAACTTGCAAGAACACCAAGTTCTATGATCTCTGCTTCTCCTCCCTCAAATCAGATCCTAGCAGCCCAGATGCAGATTCAAAGGGCTTAGCAGTGATCATGGTAGGGATTGGAATGAGCAATGCAACATCCACTTCCTCATACTTATCTTCAAAGTTGCTTAGCCCTTCCACAAACAACACAGCCTTGAAATTGGTGCTCAAGGAGTGTGCAGATAAGTACTCTTATGCAGGGGATGCACTCCAATCCTCTGTTCAGGATCTTGCTAATGAGGCCTATGACTATGCTTACATGCACATCACGGCAGCCAAAGATTACCCAAATGCTTGCCACAATGCTTTCAAACGCTACCCTCCTTTGGTTTACCCTCCTGAGCTTGCTCGTAGAGAAAATGGTTTGAAGCATATATGTGATGTGGCCATGGCCATCATTGATAATCTTGATTGGTAG 3018 0.4317 MEGALSLSLTPLSPLNMNSAIANSIDLLQFPKPFFPPKTLFTHLPRSLKPRSTLSQRILRTSFSHKSITLRKRTVTASNASGAASSSLSNTTASNQEEQQEDAESAQLFEKLKEAEKKRMNELEEFERKANVQLERQLVLASEWSRSLLTLRGKLKGTECDPENSHRIDFSEFMRLLDSNNVQFMEYSNYGQTISVILPYYKDGKTSGTDKDIVFRRHVVDRMPIDCWNDVWRKLHQQIVNVDVINVDTVPAEVYSTVATAVIWSMRLALAVGFYVWIDNMMRPIYAKLIPCDLGTPMQQTRQPIKRQALGSLGKSRAKFISAEERTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQDKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFANARSYSPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDILLKEIAELSEDFTGAELQNILNEAGILTARKDLDYIGRDELLEALKRQKGTFETGQEDSAEIPEELKLRLAYREAAVAVLACYYPEPHRPFVETDINSIRSQPNMSYTEVAGQVFARKSDYVNSIIRACAPRVIEEEMFGIDNLCWISAKATLEASRHAEFLILQTGMTAFGKAYFKNQSDLVPNLALKLEALRDEYMRYATEKCASVLKEHYSAVETITDILLEKGQINAEEIWEIYKSSPRVAQPPVSPVDEYGALIYAGRWGIHGASLPGRVTFAPGNVGFSTFGAPRPTVTQVVSDETWKLVDDIWDKKPISLVNGDATLIKRTCKNTKFYDLCFSSLKSDPSSPDADSKGLAVIMVGIGMSNATSTSSYLSSKLLSPSTNNTALKLVLKECADKYSYAGDALQSSVQDLANEAYDYAYMHITAAKDYPNACHNAFKRYPPLVYPPELARRENGLKHICDVAMAIIDNLDW* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0593 1005 Pfam AAA+ lid domain 529 572 IPR041569 -
Aev08g0593 1005 PANTHER METALLOPROTEASE M41 FTSH 67 840 - -
Aev08g0593 1005 CDD AAA 335 503 - -
Aev08g0593 1005 SMART AAA_5 364 505 IPR003593 -
Aev08g0593 1005 Pfam Plant invertase/pectin methylesterase inhibitor 854 999 IPR006501 GO:0004857
Aev08g0593 1005 Gene3D - 504 584 - -
Aev08g0593 1005 ProSitePatterns AAA-protein family signature. 473 491 IPR003960 GO:0005524|GO:0016887
Aev08g0593 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 577 IPR027417 -
Aev08g0593 1005 SUPERFAMILY FtsH protease domain-like 593 773 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev08g0593 1005 Coils Coil 521 541 - -
Aev08g0593 1005 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 852 1003 IPR035513 -
Aev08g0593 1005 Gene3D Peptidase M41 586 773 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev08g0593 1005 Coils Coil 98 132 - -
Aev08g0593 1005 SMART PMEI_2 850 999 IPR006501 GO:0004857
Aev08g0593 1005 Gene3D Invertase/pectin methylesterase inhibitor family protein 851 1003 IPR035513 -
Aev08g0593 1005 MobiDBLite consensus disorder prediction 74 105 - -
Aev08g0593 1005 MobiDBLite consensus disorder prediction 74 102 - -
Aev08g0593 1005 Gene3D - 312 502 IPR027417 -
Aev08g0593 1005 Pfam ATPase family associated with various cellular activities (AAA) 368 502 IPR003959 GO:0005524|GO:0016887
Aev08g0593 1005 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 67 840 - -
Aev08g0593 1005 TIGRFAM PME_inhib: pectinesterase inhibitor domain 848 1003 IPR006501 GO:0004857
Aev08g0593 1005 CDD PMEI_like 859 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0593 Aev-Chr8 3393272 3401999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0593 329 612 Miscellaneous Gene Families AT3G47060 47.887 1.25e-68 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0593 - - ahf:112783256 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0593 08 3393272 3401999 Aev08g0593 08 3393272 3401999 ECH