Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0580 ATGAAGATGAAGATGAGGTCCTCTTGTTCCATTTTCTTCATGTTCTTCTTTGTGGCCTTTATCAGCAGCAAAATCAAACTTTGCTTAGCAGACTGTGATAATCTGCAAGACACATGCCCTGCAGTTCCACCAGAAAAACAAACCATATTCATCAATGGTATCCCTTGCAAGAACCTACCAAACTACAACACTTCTCAAGATTTCAAGACCACAGAATTAAGCAAGGCTGGAACTAGAGACAAATTCGGTCGATCATCGATGAAAATTGTCAATGCTGCAATCTTTCCTGGCCTCAACACTCTTGGCATCTCCATTGGAAGAATCGACCTCGAAGTGGACGGGATGGTGAACCTCCACAGTCATCCAAGATCTTCTGAGATGGTCTTTGTCAACAAAGGTTTATTGGTAGCTTCATTCCTTGACACACAGAACAAGCTTTTCCAAAAGACTCTGAAAGAAGGTGATGTGTTTGTGATCCCTAAGGGATTGTTCCACTTCTTTCTGAACCGTGGATCAACAGCAGCAGTTTTGTACTCTGTGTTCAATAGCCAGAATCCAGGGTTGGAGACTCTTGGTGCTCCTACACCTTCTGATGCTATGTTGGAATCATTGCAGAAACTTAAGGGGAAGCTTGCTTCAATTTCTGACTCAGAACTTGATGATGGCAATGCTGATTTGACTATACCAGTATTAGAGATCCTGTATAGTTCGCCATTTCATATCTCATCGTGA 732 0.4221 MKMKMRSSCSIFFMFFFVAFISSKIKLCLADCDNLQDTCPAVPPEKQTIFINGIPCKNLPNYNTSQDFKTTELSKAGTRDKFGRSSMKIVNAAIFPGLNTLGISIGRIDLEVDGMVNLHSHPRSSEMVFVNKGLLVASFLDTQNKLFQKTLKEGDVFVIPKGLFHFFLNRGSTAAVLYSVFNSQNPGLETLGAPTPSDAMLESLQKLKGKLASISDSELDDGNADLTIPVLEILYSSPFHISS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0580 243 ProSitePatterns Germin family signature. 114 127 IPR019780 GO:0030145
Aev08g0580 243 SUPERFAMILY RmlC-like cupins 65 193 IPR011051 -
Aev08g0580 243 SMART Cupin_1_3 71 213 IPR006045 -
Aev08g0580 243 Pfam Cupin 85 200 IPR006045 -
Aev08g0580 243 CDD cupin_OxOx 31 211 - -
Aev08g0580 243 Gene3D Jelly Rolls 30 216 IPR014710 -
Aev08g0580 243 PRINTS Germin signature 182 197 IPR001929 GO:0030145
Aev08g0580 243 PRINTS Germin signature 119 139 IPR001929 GO:0030145
Aev08g0580 243 PRINTS Germin signature 149 169 IPR001929 GO:0030145
Aev08g0580 243 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 19 219 - -
Aev08g0580 243 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 19 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0580 Aev-Chr8 3335405 3336136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0580 17 211 Miscellaneous Gene Families AT3G05930 38.095 5.38e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0580 - - mtr:MTR_3g096330 266.929