Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0575 ATGGTAATCAAAGGACGATTTTTCGATCGCATAGTATATGAAGGGGAGGTTATAGATTTCCCAGGAGGACCAGTTAAGTTTATTCCTGAAATGAGCTTTATATCTGAATCACCTCAAGAGAGAATACCCTGCTACCGTGTTCTTGATGACAATGGACTGCCATTTTCTGCCAATAATTTCTTCCAGGTCAGTGAGGAAGTTGCTCTAAAGATGTATAACGATATGGTTACACTCCAAACAATGGACACCATCTTCTATGAAGCACAAAGGCAAGGTAGAATATCTTTCTATGCTACAACAATTGGAGAAGAGGCTATCAATATTGCATCAGCCGCAGCTCTTACCATAGATGATGTTATTTTCCCTCAGTATAGGGAACCAGGACCCCTGCTATGGCGTGGTTTCACTTTGCAAGAATTTGCAAATCAGTGTTTTTCAAATAAATATGATAATGGCAAAGGAAGGCAGATGCCAGTCCATTATGGGTCTAACAAGCACAATTACATCACTGTAGCATCAACCGTTGCTACACAAATTCCCCACGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAAAAGGATGCATGTGCGGTCACTTATTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCAGCTTTAAATTTTGCGGCAGTTATGGAGGCCCCAGTTATTTTTGTATGCCGGAATAATGGATGGGCTATTAGCACCCCTACTTCAGATCAGTTTCGAAGTGATGGTGTTGTTGTGAAAGGACAGGCATACAGAGTCAGAAGCATCCGTGTAGATGGCAATGATGCCTTGGCCCTATATAGTGCTGTAAAAGCTGCTCGTGAAATCGCAATCAGTGAAGAGCAACCAGTTCTAATAGAAGCTCTTACATATAGAGTGGGGCACCACTCAACCTCAGATGATTCCACCAAGTATCGTCCTGCGAATGAGATCAAATGGTGGAAATCGGCTCGAGATCCTGTGGCTAGATTTAGAAAGTGGATAGAAAGGAATGGCTGGTGGAACGGTACGGCCGAGTTAGAGCTTAGGAACAGTCTTAGACAGAAGCTTTTGCATGCAATTCAAGTCGCGGAGAATGCGGAAAAGCCTCCAGTTTCAGACATATTTAGCGACGTTTATGATGTCCCTCCATCCAATCTTCGCGAACAGGAGCAATGGCTGAAAGAGACTATAAAGCAACATCCGCAAGAGTACCCGGCAAATGTTTCTGTGTAG 1233 0.4347 MVIKGRFFDRIVYEGEVIDFPGGPVKFIPEMSFISESPQERIPCYRVLDDNGLPFSANNFFQVSEEVALKMYNDMVTLQTMDTIFYEAQRQGRISFYATTIGEEAINIASAAALTIDDVIFPQYREPGPLLWRGFTLQEFANQCFSNKYDNGKGRQMPVHYGSNKHNYITVASTVATQIPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVMEAPVIFVCRNNGWAISTPTSDQFRSDGVVVKGQAYRVRSIRVDGNDALALYSAVKAAREIAISEEQPVLIEALTYRVGHHSTSDDSTKYRPANEIKWWKSARDPVARFRKWIERNGWWNGTAELELRNSLRQKLLHAIQVAENAEKPPVSDIFSDVYDVPPSNLREQEQWLKETIKQHPQEYPANVSV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0575 410 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 14 409 - -
Aev08g0575 410 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 41 405 IPR029061 -
Aev08g0575 410 Pfam Dehydrogenase E1 component 75 371 IPR001017 GO:0016624
Aev08g0575 410 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 14 409 - -
Aev08g0575 410 CDD TPP_E1_PDC_ADC_BCADC 71 363 - -
Aev08g0575 410 Gene3D - 13 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0575 Aev-Chr8 3306710 3309008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0575 16 248 Acyl Lipid Metabolism Gene Families AT5G09300 81.545 2.86e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0575 K00166 - gmx:100779198 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0575 08 3306710 3309008 Aev08g0575 08 3306710 3309008 ECH