Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0555 ATGATCTGTTGTTTCTCCACCGAGAACTCGCGATTCGAAGCTCTTTCCACTGAAATCTCATTCAGATCTGGGTTTGATTCCTCTTTTCATCGATCTGCTCGGTTTTGTTCGTCGGAAATGTCGATTTTACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTATGGAACGATAACCTAGAAGAGGAGTTCGCGTTGATCCGCGAAATCGTTGACGAATACAACTACGTAGCCATGGACACGGAGTTCCCCGGCGTTGTTCTTCGTCCCGTGGGGAACTTCAAGAACATCAACGACTACAACTACCAAACCCTGAAGGACAACGTTGACATGCTGAAGCTGATCCAATTAGGTCTCACCTTCTCCGATGAGAACGGAAACCTTCCAACTTGCGGTACCGAAAGCTCCTGCATCTGGCAATTCAACTTCCGCGAGTTCAACATCAGCGAGGACATCTTCGCAAGCGATTCGATCGAATTACTGCGCCAATGCGGCATCGATTTCAAGAAGAACAACGAGAAAGGGATCGACGTGATCCGGTTTGGTGAGCTCCTTATGTCCTCCGGAATCGTGCTCAACGACGGCATGAATTGGGTAACATTCCACAGCGGCTACGATTTCGGTTACCTCCTCAAGCTGTTAACGTGCCGATCCTTGCCTGATTCACAGGGAGGGTTCTTCGAACTGATCAATATGTATTTCCCAATGGTTTACGATATCAAGCACTTGATGAAGTTCTGTAACAGCCTCCACGGTGGTTTGAACAAGCTCGCGGAGCTTCTAGAAGTCGAGAGAGTTGGTGTGTGCCATCAAGCTGGATCCGATAGCTTGCTCACTTCATGTACATTTAGAAAATTGAGGGATACCTTCTTCAATGGCTCCACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAATGGACAAACTAATTGA 939 0.4739 MICCFSTENSRFEALSTEISFRSGFDSSFHRSARFCSSEMSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESSCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNNEKGIDVIRFGELLMSSGIVLNDGMNWVTFHSGYDFGYLLKLLTCRSLPDSQGGFFELINMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0555 312 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 40 311 IPR039637 GO:0004535|GO:0030014
Aev08g0555 312 Gene3D - 38 308 IPR036397 GO:0003676
Aev08g0555 312 Pfam CAF1 family ribonuclease 54 175 IPR006941 -
Aev08g0555 312 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 40 311 - -
Aev08g0555 312 SUPERFAMILY Ribonuclease H-like 51 304 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0555 Aev-Chr8 3152438 3155203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0555 K12581 - gmx:100798365 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0555 08 3152438 3155203 Aev08g0555 08 3152438 3155203 ECH