Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0545 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGATGCCTTTCAAGCTCAGGGAAACTCCATCAGGTATGTATCATCTGAATTGGCCACTGATGTTACCATACATGTTGGTGAAGTCAAGTTTTACCTTCATAAGTTCCCTCTATTGTCCAAGTGCAACCGATTCCAAAAGTTGGTGTCAAAAGCTAATGAAGAGGATTCTGATGACATATACTTGGATGATTTCCCTGGAGGACCTAATGCATTTGAAATATGCGCGAAATTCTGTTATGGAATGATTGTTACTCTCAATGCATACAATGTTGTAGCTGCTCGTTGTGCAGCTGAGTACCTTGAGATGACAGAGGAAATTCATTGGGGAAACTTGGTTTTTAAAATTGAAGTGTTTCTTAACTCAGGCATCTTCTGTTGTTGGAAGGATTCCATAATTGTTCTCCAAACTTCAAAATCTCTTCTTCCGTGGTCCGAGGATCTGAAGATCATAGGGAGGTGCATAGATTCCATTGCTTGTAAGACTAGTGTTGATCCAGCAAACATCATTTGGTCCTACACTTATAACAGGAAATTGGCAGAGTGTGATAGAATTGTTGATCACAAGATGGCATTTCTAGACAACATTGAGTCTGTTCCTAAGGATTGGTGGGCTGAAGATATATGTGAGCTTGACATTGATCTTTATAAAAGAGTAATGATTGCTGTGAAATCAAAGGGGAGAATGGATAGTGCTGTGATTGGGGAGGCACTCAAAGTCTATGCAGGGAGATGGTTACCTGATTCCATTGATGCATTGGTTTCTGATGCATCAAGGAACAAATCCTTAGTAGAAACAATTGTCTGCTTATTGCCATGTGATAATGGTGTGGTTTGTTCATGTAGTTTCTTGCTGAAGCTACTAAAAGTGGCCATGTTAGTCGAAGCAAATGAGTCGACACGAGAAGAATTGATGAGTAGCATTGGCCAAAAATTGCATGAAGCTTCTGTTAAAGATTTATTGATTCCATCAAGGTCTCCTCAGACTACCACATATGATGTTGATTTGGTACAAGGTCTTTTGAATCAATACATGATTCATGAAAAGGGAAGCTGCAATATGGAGGTAGTTGAGGAGAAAGATAAAGGAAAATATCAATACTTTTCAGGTCATAGGTCCTTGTTCAAAGTTGGCAAGTTGGTGGATGGTTTCCTTGCAGAAATTGCTCATGATCTTAATCTTTGTCTCTCTAGTTTTGTTGATCTGTCACAATCAATTCCAGATTATGCTAGACCGAATCATGATTCCCTTTACAGAGCCATCGATGTCTACCTGAAGGAGCATCCAGATTTGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTAATGGATGTGAAGAAATTGACAGTGGATACTTCAATGCAGGCTGCGCAGAACGAACGGCTTCCTCTTCGAGTGGTGGTGCAGGTTCTCTTCTTTGAGCAGCTTAGAGCTTCAGCCAGAGCTCAAGCAATCCGTAGTGATTCACATGATAGTCCTTTGCACGCCGCGGTGACCGGAGATAATGGACGGCCTGAGAATGCAGTGGTGAAGAGATGCCAATCCCTCAACATACATTTGAGCCATTCAAAGATCAGAGATGAGGAGTTCAATAATAAGAATGAGAAGGTGAGTAAGAAGAACAGTAGCAGAAGTGGAATTCAGTTGCTGAGGTCACAGTCAAGGAGAATCTTTGATAAGCTGTGGATTGTGGGAAAGGGACATGGAGAGAATAATAAGAGTCCTGATGATCATGAGACTTCAGGTTCTAATAGCCCAACTTGTGATGTAGGCAATGGAGATACTGCTAAATCATCTGGTTTGAGAAACCAGAGGCATTCTATCTCTTAG 1860 0.4097 MKFMKLGSKPDDAFQAQGNSIRYVSSELATDVTIHVGEVKFYLHKFPLLSKCNRFQKLVSKANEEDSDDIYLDDFPGGPNAFEICAKFCYGMIVTLNAYNVVAARCAAEYLEMTEEIHWGNLVFKIEVFLNSGIFCCWKDSIIVLQTSKSLLPWSEDLKIIGRCIDSIACKTSVDPANIIWSYTYNRKLAECDRIVDHKMAFLDNIESVPKDWWAEDICELDIDLYKRVMIAVKSKGRMDSAVIGEALKVYAGRWLPDSIDALVSDASRNKSLVETIVCLLPCDNGVVCSCSFLLKLLKVAMLVEANESTREELMSSIGQKLHEASVKDLLIPSRSPQTTTYDVDLVQGLLNQYMIHEKGSCNMEVVEEKDKGKYQYFSGHRSLFKVGKLVDGFLAEIAHDLNLCLSSFVDLSQSIPDYARPNHDSLYRAIDVYLKEHPDLTKAERKKLCGLMDVKKLTVDTSMQAAQNERLPLRVVVQVLFFEQLRASARAQAIRSDSHDSPLHAAVTGDNGRPENAVVKRCQSLNIHLSHSKIRDEEFNNKNEKVSKKNSSRSGIQLLRSQSRRIFDKLWIVGKGHGENNKSPDDHETSGSNSPTCDVGNGDTAKSSGLRNQRHSIS* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0545 619 Pfam NPH3 family 212 462 IPR027356 -
Aev08g0545 619 MobiDBLite consensus disorder prediction 497 517 - -
Aev08g0545 619 Pfam BTB/POZ domain 26 115 IPR000210 GO:0005515
Aev08g0545 619 Gene3D Potassium Channel Kv1.1; Chain A 12 124 IPR011333 -
Aev08g0545 619 MobiDBLite consensus disorder prediction 588 619 - -
Aev08g0545 619 CDD BTB_POZ_NPY3-like 22 125 - -
Aev08g0545 619 MobiDBLite consensus disorder prediction 576 619 - -
Aev08g0545 619 PANTHER OS12G0117600 PROTEIN 7 596 IPR043454 -
Aev08g0545 619 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Aev08g0545 619 ProSiteProfiles NPH3 domain profile. 212 487 IPR027356 -
Aev08g0545 619 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 7 596 IPR029961 GO:0060918|GO:0099402
Aev08g0545 619 SUPERFAMILY POZ domain 23 115 IPR011333 -
Aev08g0545 619 MobiDBLite consensus disorder prediction 537 559 - -
Aev08g0545 619 Coils Coil 614 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0545 Aev-Chr8 3077843 3081342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0545 14 550 EF-hand Containing Proteins AT3G44820 31.633 2.71e-92 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0545 - - gmx:100784205 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1340 07 12114699 12120478 Aev08g0545 08 3077843 3081342 PCT