Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0525 ATGCTTGCCGGAGGAGTGTCATGGGATCTGAATTGGCTCCTGCAGTGGATATTCTCGGCGTTCGTGGTGGCCGTGGGATTGCACACGCTCGTCAAGAACACGGCTTCCAAGTACTTTGAGGTGGACGCTAATTTCGACTCTGATCGGAATCAAATGCCCCCACCTCCTGCTGCTGCTCTCATGGACGACCCTGTCTGCGCCGTCTGTGCTAACCCCGGCAACAAGAAGTGTTCCCGCTGCAAATCCGTTCGATACTGTTCACAAGCATGCCAACAGGCACACTGGAGATCTGAGCATAAGCTGAAATGCAAGGAATTTAATGGTACTAGTACAATAAATATGTCTCAAACTGGGCCTGCTAATCAGGGGATTAAAGCTTCTGCTGCTGTGAATAAAAGTACATCTTCGGTTGCCCTGATCCCTGAACGCGGACGAGGAACTTCCAGTGCCAGGCCTATCAAGCAGCCTAAAAATGCTCTTTTTCCTTATGGTGAATTTGTTAAATATTTTAACTGGGACAAGACGGGATTTCCTCCTTGTGGACTCTTGAATTGTGGAAACAGCTGCTTTGCAAATGTGGTTCTCCAATGCCTCTCATTTACTAGGCCGCTTGTTGCATACTTGTTGGAGAAGGGCCATCGCAGAGAATGCTATCGTAATGATTGGTGCTTTCTGTGTGAATTTGAGCTGCATGTTGAAAAAGCAAGGCTAAGTTCACAGGCTTTTTCTCCAATGAATATTCTCTCTCGTTTGCCTATAATTGGTGGTACACTGGGTTATGGAAGACAGGAGGATGCTCATGAGTTCATGAGGTTTGCCATTGATACTATGCAATCTGTTTGCCTTGATGAATTTGGTGGAGAAAAAGCTGTCCCTCCAAAGCTTCAGGAAACAACCCTTATTCAACACATTTTTGGCGGCCACCTTCAATCTGAGGTTGTGTGCACAAAATGTGAGAAGAATTCAAATCAGTATGAAAATATGATGGACTTGACAGTTGAAATTCATGGAGAAGCTGCTTCCTTGGAGGAATGTCTAGATCAGTTCACTGCTAAAGAGTGGCTTCATGGAGAAAATATGTATAAATGTGATGGGTGCAAGGAATATGTTAAGGCATGCAAACGTCTCACTGTGAAACGAGCTCCAAATATTCTTACAATTGCCTTAAAAAGATTTCAGAGTGGGAGGTTTGGAAAACTTAACAAGAGAGTAACTTTTCCTGAGACTTTAGATCTTAGCCCTTTCATCAGTGAAGTTGGAGATGGATCTGATATCTATAAGCTATATGCTGTTGTAGTCCATATTGATATGCTGAATGCTTCATTTTTTGGTCACTACATCTGCTACATCAAGGATTTCCGTGGAGACTGGTATAGGATTGATGATTGGAAGGTAATGCGAGTGGAATTGGAGGAAGTACTTTCTCAGGGCGCTTACATGTTATTATATAGCAGGGTTAGTGCCAGGCCATTAGCCCTTCAAACTATTGAGTCTTCGGAGATGGATGCTCAAACAGTGGAAGTGGCGCCTGGTCCAACTGAACAAGCTGAATGCGTCTCAAATATGGAGACTGTAACCTGCAATGGAGGAGGTGATGCATTTCCATCTGATAGTAGTTCAGAACTGAAGTTTTCTGGCTGTGAAAACAAGTCTTTGGATGGAATGAGATCTCGTGCAGAAAGGGTGCATGCTAAGGATATTGACTTGATTGATGTTGCAAATGACCCTTCCTGTACTGCTACCGAAACATCTTATATATCTTCACCTCAGTCTGTCAAAGATTTGGAGGATATGGATATGAGCAGATCAAATCCATGTTCATCTTCTTCTGAAGATATTACAGGCTGCACAGAAGAAGAGCAAATTTTTACTGATATGGCTAAGTCTGGTCCTTCTCCAGGTTTGCTGAATGGATTTTCTTGCCTCAATGATTCTTCTGTTTCAATGGATTATCAAAACTCAAGGGAAGAAGAAGATTCAGGGCATGTAGATGTGGTTAAATGCAAGCCAATAACTGCTCAAGGACATGAAAATTATGGCAATGGGTATGCTTGTGCGAACAAATATGCTGCTCCAGTTGATGATGGTGGCACTGTTTTTGGTTCTATTTCGACTGAAACATCATCAGCTGAGATGCATCAATTGAAGCGGAGATTGCCATTTTACAGTTCTGAATCTGACCAAGCAAATGGAGTTAAGAAAGTTGAAATATCAGGGGACCAGTTAATAATGTAG 2235 0.4291 MLAGGVSWDLNWLLQWIFSAFVVAVGLHTLVKNTASKYFEVDANFDSDRNQMPPPPAAALMDDPVCAVCANPGNKKCSRCKSVRYCSQACQQAHWRSEHKLKCKEFNGTSTINMSQTGPANQGIKASAAVNKSTSSVALIPERGRGTSSARPIKQPKNALFPYGEFVKYFNWDKTGFPPCGLLNCGNSCFANVVLQCLSFTRPLVAYLLEKGHRRECYRNDWCFLCEFELHVEKARLSSQAFSPMNILSRLPIIGGTLGYGRQEDAHEFMRFAIDTMQSVCLDEFGGEKAVPPKLQETTLIQHIFGGHLQSEVVCTKCEKNSNQYENMMDLTVEIHGEAASLEECLDQFTAKEWLHGENMYKCDGCKEYVKACKRLTVKRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPFISEVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFRGDWYRIDDWKVMRVELEEVLSQGAYMLLYSRVSARPLALQTIESSEMDAQTVEVAPGPTEQAECVSNMETVTCNGGGDAFPSDSSSELKFSGCENKSLDGMRSRAERVHAKDIDLIDVANDPSCTATETSYISSPQSVKDLEDMDMSRSNPCSSSSEDITGCTEEEQIFTDMAKSGPSPGLLNGFSCLNDSSVSMDYQNSREEEDSGHVDVVKCKPITAQGHENYGNGYACANKYAAPVDDGGTVFGSISTETSSAEMHQLKRRLPFYSSESDQANGVKKVEISGDQLIM* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0525 744 Pfam Ubiquitin carboxyl-terminal hydrolase 180 483 IPR001394 GO:0004843|GO:0016579
Aev08g0525 744 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 19 666 - -
Aev08g0525 744 SUPERFAMILY Cysteine proteinases 176 496 IPR038765 -
Aev08g0525 744 CDD Peptidase_C19E 179 484 - -
Aev08g0525 744 Gene3D Cysteine proteinases 174 493 - -
Aev08g0525 744 Pfam MYND finger 66 103 IPR002893 -
Aev08g0525 744 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 180 486 IPR028889 -
Aev08g0525 744 ProSiteProfiles Zinc finger MYND-type profile. 66 103 IPR002893 -
Aev08g0525 744 ProSitePatterns Zinc finger MYND-type signature. 66 103 IPR002893 -
Aev08g0525 744 Gene3D - 58 107 - -
Aev08g0525 744 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 181 196 IPR018200 GO:0004843|GO:0006511
Aev08g0525 744 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 666 - -
Aev08g0525 744 SUPERFAMILY HIT/MYND zinc finger-like 63 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0525 Aev-Chr8 2965710 2969873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0525 5 489 Miscellaneous Gene Families AT4G31670 65.377 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0525 K11855 - gmx:100810577 1068.53