Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0524 ATGCTGCTTAATAGTTTCCTAGCTCAGCAGCTTTTGCAATTGCTGGTTGCAGAACTGAAGAATCGTGTGATATTCTTAAGAAACAAATCATCGGGGAAGAAGGGTTGGGAACAAAGGGGGAAAAAATTGTTTTCTCCAAAATTTTCATCAATGGAAAGTCCTAATGATTGGCATGTTCGAAGTAGAAGTTTGAAGAGAAAATCACCAGAAAGTGGAGATCATCTACTATTCAACAACTTTTCTTTGGATGATCTTAATGAGGATCTCTTGGAAAGGGTACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTTACATCTGTGTCCAAAAGATGGAAATCAGTTGCTGCTTCTGCCAGTTTCAAGCTCGCCTGCTCCAACATTCCTTCAAGGGATCCTTGGTTTTTCATGGTTGCTCCAAACCTCAACCAATCTATCATCTTTGACTCTGCCCAAGGCGCTTGGAAAAGACTCAATCACCCGCCTCTTCTGCACCAAGATTCTAACCGAGGCTGCATGCCGGTTGCAGCCTCTGGCGGCTTGATTTGCTACCGTAAATTATCAGGAAACTTCATTGTAAGCAATCCTGTGACAGGAACTTGTAGTGAACTCCCTCCACTTGATTTTGGCCCGCAGCATCAACCACTCAATGCCATTGTGATGAGCACAACTTCAAAAGACCAACTCTCCTACAAAATTGTGTTAGTCTTGGGTGAACTTCCAAATCTTCTGTTTAAAGTCTACAATTCAGGCTCTGGCTGTTGGGAAGGTGAGACTGCACTGAGGAGAAAGGTTGATGATGCTTCCATGGAGCATGATTCTACTGAAGAGAATGTTGTGTACTTCCTTAGCAAGGCCGGAATTGTGGTGGCAAGCAACATGCAGAGAAGCCCATCAAAGCAATACTCATCAGTTATTACCAACAAAGATGGTGAGGAGATTGTCTATTTTCTTAGCTCCTCAGGGACAGTAGTTTCTTGCAATTTGACCTGCAAATGCTTCTTTGAGTACCCTAGATTGTTACCAGCTCTGAGTGAGTATTCCATTGATGTTGTGGAGTGTAATGGGGAGATGCTAGTTGTTCTGTTATCGGAGTTCTTGGAATCGGCATCTCTTCGGGTGTGGAAATACGATGAAGCGAAGCGGGGCTGGAACCAGATTGCAGCAATGCCTGCAGCACTGTCTCATGAGTGGTATGGAAAGAAGGCAGATATTAACTGTGTTGGGGCTGGTAACCAGATATTTATATGCTTGAATTCCACTGAGCTATGCACTTACATTCTCTGTGATTTGGTGACCAACAAGTGGGTTGAATTGCCAAACTGTTGCATAAATGGTGAAGTCATAGACTTCATGTGTGCTTTTTCATTTGAGCCAAGAATAGAGGCTTCTGTATGA 1398 0.4335 MLLNSFLAQQLLQLLVAELKNRVIFLRNKSSGKKGWEQRGKKLFSPKFSSMESPNDWHVRSRSLKRKSPESGDHLLFNNFSLDDLNEDLLERVLSWLPTSTFFRLTSVSKRWKSVAASASFKLACSNIPSRDPWFFMVAPNLNQSIIFDSAQGAWKRLNHPPLLHQDSNRGCMPVAASGGLICYRKLSGNFIVSNPVTGTCSELPPLDFGPQHQPLNAIVMSTTSKDQLSYKIVLVLGELPNLLFKVYNSGSGCWEGETALRRKVDDASMEHDSTEENVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGEEIVYFLSSSGTVVSCNLTCKCFFEYPRLLPALSEYSIDVVECNGEMLVVLLSEFLESASLRVWKYDEAKRGWNQIAAMPAALSHEWYGKKADINCVGAGNQIFICLNSTELCTYILCDLVTNKWVELPNCCINGEVIDFMCAFSFEPRIEASV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0524 465 Gene3D - 77 122 - -
Aev08g0524 465 PANTHER F-BOX/KELCH-REPEAT PROTEIN 76 465 - -
Aev08g0524 465 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 76 465 - -
Aev08g0524 465 Pfam F-box domain 82 117 IPR001810 GO:0005515
Aev08g0524 465 SMART fbox_2 85 125 IPR001810 GO:0005515
Aev08g0524 465 SUPERFAMILY F-box domain 80 137 IPR036047 GO:0005515
Aev08g0524 465 ProSiteProfiles F-box domain profile. 79 124 IPR001810 GO:0005515
Aev08g0524 465 SUPERFAMILY Galactose oxidase, central domain 145 443 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0524 Aev-Chr8 2956451 2957968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0524 - - gmx:100786481 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0524 08 2956451 2957968 Aev08g0524 08 2956451 2957968 ECH