Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0520 ATGGGCCCAAGCCCAATGATCTCTGCAGAAAGGGCTCTCCTTCAACCCAAAAAAAAAAAGAAAAGATTGGTTCTCCCTTCCCGCTTCTTTCTGACTTCTCAGCAACATTTCCACAAACAGTTTGGAGTGATGAAGAAGATCAACGCAGCTTCCATTGTCTTGCAGGTTCCAAGCGTGTTTCGTCGTCGATGGATGACGACGAGCAAGAGGGTCCAAGACAGGAGTAAGCAGAAGAGGATCCACGATCTCGAAGTCACAACCGAGAAATGGAAGATTCTATCCAAGATCCTCTTCCTCATCGAAACCCTCAAGCAGCAGCCCGAGATGATCATCCCCGTTCGCTCCCTCGAAAACCACCGCAAACAGCTCAGCCTCCCGAAGCCGCACAGAATCTCCGATTTCATTCGCAAGACGCCCAAGCTCTTCGAGCTCTATAAGGACAGCAAGGGTGTGTTGTGGTGCGGCATGACGGAGAAAGCAGAGGAATTGGTCGAGGAAGAGCAGAAGGTCCTGGAACGTCACGCGGATAAGGCCGCGGAACACGTTACGAGGCTCCTCATGATGTCGGTGGATAAGCGTCTTCCTTTAGAAAAAATTTCTCATTTCAGAAGGGATTTCGGGTTGCCCTTGGATTTTAGGGTTGATTGGGTGCACCGATATCCGCAGAAATTTAAGGTTGTGAAGTCAATTGACGAAGTTGAGTTCTTGGAGCTTGTGTCTTGGAACCCTAAATGGGCAATCACTGAGCTTGAGAAGAAGGTAAGTGGGGTAACTGAATCCACCACCAATTTGCATACACCTGGCATGCTTTCACTTCCATTCCCTTTGAAATTCCCAGCAAATTATAAGAGGATATCTCGCTACAATGTAAAGATTCAAGATTTTCAAAAAAGGGCTTATTTGTCTCCATATGCTGATGCGCGTGGTCTTAAGGCTGGTTCTCTTGAATTTGATAAGAGGGCAATTGCTGTTATGCATGAGATTCTCAGTTTCACCATTGAGAAGAGGCTTGTCACTGATCACCTCACTCACTTTCGTTGGGAGATGGTGATGCCCCAGAAGCTCATGAGGTTGCTTCTGAAGCATTGTGGGATATTCTATGTCTCCGAGAGGGGGAAGAGGTTTAGTGTGTTCCTGACCGAAGCTTATGAAGGCTCGGAGCTGGTTGAGAAATGCCCCTTGGTCCTCTGGAGGGAAAAGGTTTTGAGCCTTGTTGGTTACAGAGGAAGGAAGAAGAAGTTTGAGACACTCAGCGACACGTCAGATGCGGAAGAAGGTGATGTTGGTTTGCTTCGGAGTGACTCTGAAGTTGGGAACTTGGATGTGCAACTTGAGCAACAGCGTACCATGGATTATGAGGATCCTTTGGTTGAGGAAAGTTCTGACATGGATGTTGAAGAGATTGCCTATGAATATCAAAAGTTCAAAACTTCTTGA 1437 0.4704 MGPSPMISAERALLQPKKKKKRLVLPSRFFLTSQQHFHKQFGVMKKINAASIVLQVPSVFRRRWMTTSKRVQDRSKQKRIHDLEVTTEKWKILSKILFLIETLKQQPEMIIPVRSLENHRKQLSLPKPHRISDFIRKTPKLFELYKDSKGVLWCGMTEKAEELVEEEQKVLERHADKAAEHVTRLLMMSVDKRLPLEKISHFRRDFGLPLDFRVDWVHRYPQKFKVVKSIDEVEFLELVSWNPKWAITELEKKVSGVTESTTNLHTPGMLSLPFPLKFPANYKRISRYNVKIQDFQKRAYLSPYADARGLKAGSLEFDKRAIAVMHEILSFTIEKRLVTDHLTHFRWEMVMPQKLMRLLLKHCGIFYVSERGKRFSVFLTEAYEGSELVEKCPLVLWREKVLSLVGYRGRKKKFETLSDTSDAEEGDVGLLRSDSEVGNLDVQLEQQRTMDYEDPLVEESSDMDVEEIAYEYQKFKTS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0520 478 Coils Coil 157 177 - -
Aev08g0520 478 PANTHER EXPRESSED PROTEIN 56 469 - -
Aev08g0520 478 Pfam Plant organelle RNA recognition domain 78 408 IPR021099 GO:0003723
Aev08g0520 478 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 56 469 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0520 Aev-Chr8 2934222 2935658 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0520 - - aprc:113865655 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0520 08 2934222 2935658 Aev08g0520 08 2934222 2935658 ECH