Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0518 ATGAACTCGATTTTCGATTTGGATCGTAGCCAAACGCAACCTCAATTCTCTCTGTTCGAAGAAGACGAAGACGATGAGTTTCAGGTTCCTCTCACGCAAACGACACTTTCTCCTCAACCCCTCACCGATTCCAATCACCGTCCATCGAAGAAACCTAAACACAAAACCACACATTTCATCGGCAAGGAGAACGTTCCCCCTAATCCTCCTCACGAAATCGAAATTGAAAACTGCAGCTTGGATTGCATCCCTTCTACCATAGATTGCAGCATCGCGCAACACTCCCACCGAGACGACGTCGTTTCTTGCTGTTCTGCTTCCGAGGAGCTGAAAACGAAGGGTGCTTACTTTCGGAACTCGATTGAGTCTAAGCTGGTGGTGTTGGGAACCGACGCGCTTAAAGACGGATCTGGAAAATTGTTGAGAGATGAGGACGGTGATGATTCGGAGCTCGATCTGTTGCTAAATTTGTGCAATGAGATAGACGAAGCTGATGACTCAGCGGTGTTGCCACGTGGCGATGGCGATGGAGGCTCAGTTCGTTGTCCACTGTGTGGTGTTGATATTTCGAATTTGAGTGAGGAACAGCGACACCTTCATACCAATGACTGTCTCGATAGTGTAGAAGATGAAGCTCAAGATGGTGTTCTTCCTGATGATGAGGATGAGATGGTGGCTCAATTGGCACCGAAACAGAAAGATGGGAATGTTTCTGCAGTTGTTGATTGGCTGCGCAGTATCGGGTTAGAGAAATACGAATATGTTTTTGTGAGGGAAGAAGTTGATTGGGACACCTTGCAGTGTCTGACAGAAGAAGATCTATTAAGTATTGGTATAGTTGCTCTTGGCCCCAGAAAAAAGATTGTACATGCCCTTTGTGAACTTAGAAAAGGAGTTGACCCTTCAGAGGAGAAACATGAGGATGCTCCTGCAGAACCTAGAAGGATACGAAACCAGGGAGTTAAAGTGCCACGTGACAAATCTGAAAGAAAAGTTGATGCCACTAGTAAACCAGTGGCAAACAAATTGATTACTCAATATTTTCCAGGCTTTGGTGTCAATGGAAAGAAAGCATCTGCCACTACCACTCCTGCAGAAAAGCATGAAATAAAAAACAATAGCAGGGATTCTGGCCGTAAGACCAAAGCGAAAAATATGTCAACAAATAGAAAACTTCGTGATGTTCCTAAATGGTGTAGCATACCAGGGACGCCTTTCCGAGTGGATGCTTTCAAGTATCTCAGAAGGGATTGTTCTCACTGGTTTCTCACACACTTCCATTTAGATCATTATCAAGGTCTCACCAAATCGTTCAGTCATGGAAAGATCTATTGCTCTTCTGTTACTGCTAGACTTGTAAATATGAACATTGGGATTCCCTATGATAATTTACATGTTTTGCCTCTAAACGAAAAGGTTTCAATAGCTGGTGTTGATGTGACTTGCTTGGATGCCAATCATTGTCCGGGTTCCATAATCATACTCTTTCAACCTCCGAATGGTAAGGCGGTGCTCCACACTGGGGATTTTCGCTTTAGTGAAGAAATAGCAAACAATTCTTTCCTCCGCATGTGCCCTATCCATACTCTGATTCTTGATACAACATACTGTAACCCACAGTATGACTTTCCAAAACAAGAGGCTGTCATACAATTCGTTATTGATGCCATTCAAGCAGAGGCTTTTAATCCTCAGACCCTTTTTCTGATTGGAAGCTATACTATTGGAAAAGAAAGGCTATTCCTGGAGGTTGCTCGTACGCTTCGTAAGAAGGTTTACGTGACACCAGCAAAGCTGCGTCTTCTGAAATGTTTGGAGTTTGAGGAGGAGGATATGCAGTGGTTTACTTTGAATGAACACGAAAGCAACATTCACGTTGCCCCTATGTGGACACTGGCAAGCTTCAAAAGACTGAAACACATATCAAGTCAATATGCGGGTCGGTATAGTCTGATAGTCGCTTTCTCTCCCACTGGTTGGACTTTTGGCAAAGGTAAAAAGAAGTCACCTGGGAGAAGGTGGCAGCAGGGTACTATCATAAGGTATGAAGTGCCATATAGTGAGCATTGCAGCTTTGAAGAACTTAAAGAGTTTGTGAAACATATATCCCCTGATAACATCATACCAAGTGTGAATAATGACGGACCAGAGTCTGCCGATGCAATGATTTCCCTATTGTTATCTTGA 2187 0.4367 MNSIFDLDRSQTQPQFSLFEEDEDDEFQVPLTQTTLSPQPLTDSNHRPSKKPKHKTTHFIGKENVPPNPPHEIEIENCSLDCIPSTIDCSIAQHSHRDDVVSCCSASEELKTKGAYFRNSIESKLVVLGTDALKDGSGKLLRDEDGDDSELDLLLNLCNEIDEADDSAVLPRGDGDGGSVRCPLCGVDISNLSEEQRHLHTNDCLDSVEDEAQDGVLPDDEDEMVAQLAPKQKDGNVSAVVDWLRSIGLEKYEYVFVREEVDWDTLQCLTEEDLLSIGIVALGPRKKIVHALCELRKGVDPSEEKHEDAPAEPRRIRNQGVKVPRDKSERKVDATSKPVANKLITQYFPGFGVNGKKASATTTPAEKHEIKNNSRDSGRKTKAKNMSTNRKLRDVPKWCSIPGTPFRVDAFKYLRRDCSHWFLTHFHLDHYQGLTKSFSHGKIYCSSVTARLVNMNIGIPYDNLHVLPLNEKVSIAGVDVTCLDANHCPGSIIILFQPPNGKAVLHTGDFRFSEEIANNSFLRMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPQTLFLIGSYTIGKERLFLEVARTLRKKVYVTPAKLRLLKCLEFEEEDMQWFTLNEHESNIHVAPMWTLASFKRLKHISSQYAGRYSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFEELKEFVKHISPDNIIPSVNNDGPESADAMISLLLS* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0518 728 Gene3D - 231 308 IPR013761 -
Aev08g0518 728 SMART SAM_4 232 298 IPR001660 GO:0005515
Aev08g0518 728 PANTHER DNA CROSS-LINK REPAIR 1A PROTEIN 180 724 - -
Aev08g0518 728 Gene3D - 542 689 - -
Aev08g0518 728 Pfam SAM domain (Sterile alpha motif) 236 294 IPR001660 GO:0005515
Aev08g0518 728 Gene3D - 401 711 IPR036866 -
Aev08g0518 728 MobiDBLite consensus disorder prediction 1 69 - -
Aev08g0518 728 ProSiteProfiles SAM domain profile. 235 298 IPR001660 GO:0005515
Aev08g0518 728 MobiDBLite consensus disorder prediction 299 335 - -
Aev08g0518 728 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 180 724 - -
Aev08g0518 728 SMART Lactamase_B_5a 290 541 IPR001279 -
Aev08g0518 728 MobiDBLite consensus disorder prediction 358 389 - -
Aev08g0518 728 CDD SAM_superfamily 240 292 - -
Aev08g0518 728 CDD SNM1A-1C-like_MBL-fold 387 539 - -
Aev08g0518 728 MobiDBLite consensus disorder prediction 29 45 - -
Aev08g0518 728 MobiDBLite consensus disorder prediction 362 389 - -
Aev08g0518 728 MobiDBLite consensus disorder prediction 1 17 - -
Aev08g0518 728 SUPERFAMILY Metallo-hydrolase/oxidoreductase 405 710 IPR036866 -
Aev08g0518 728 SUPERFAMILY SAM/Pointed domain 235 297 IPR013761 -
Aev08g0518 728 Pfam DNA repair metallo-beta-lactamase 610 714 IPR011084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0518 Aev-Chr8 2919343 2922894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0518 238 292 Glycosyltransferase AT3G07170 49.091 9.77e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0518 K15340 - gmx:100816321 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0518 08 2919343 2922894 Aev08g0518 08 2919343 2922894 ECH