Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0505 ATGGGTACTCAAAGAGCACATTGGGCCATCATTGTAGTAGTATTATGGCTTACTTTGTTTGAAGGGAATATGATGCATGTTAATGGTGATTTCAATTACAAGGAGGCTCTCACAAAGTCCTTAATTTTCCTAGAGGCACAACGATCAGGGAAGCTACCTTCCAATAACAGGGTCCCTTGGAGAGGAGACTCAGCACTTGATGATGGAAAACTAGCTAATGTGGACCTTGCTGGGGGTTACTATGATGCAGGGGATAATGTGAAATATGGCCTACCCATGGCATTCACAGTTACTACTCTGTCATGGGCTGCCATTTTTTACAAATCAGAATTAGAAGCTGCAAATGAAATGGGACATGTTCAAGATGCTATTCGATGGGGTACTGATTATTTCCTCAAAGCTAGTTCTAGAAGGCAAAGATTATATGTGCAGGTAGGGGACCCGGAAGATGATCACCATTGTTGGATTCGACCAGAGAATATGAAAACAAAAAGAACTGTTCTGAAGATTGACAGTAGCACGCCAGGGACTGAGATTGCAGCTGAAACTGCAGCGGCAATGGCTGCTTCTTCCATTGTTTTTAGGCACTCAGATTATACATATGCTCAAAAAATCCTTAATAAAGCTAAACTACTTTTCGAAATGGCGAAATCGCATAAAGGAACTTATGATGGAGAGTGTCCCTTCTACTGCTCTTACTCAGGATATAATGATGAACTTTTGTGGGCTGCAACGTGGCTATACTTGGCTACAAATAAGCCAATGTATCTGACATACATCAAAGAAGAAGCTATTAGTGCTAATGTTGCAGAGTTCAGTTGGGACCTTAAATATGCAGGGGCTCAAATCCTTCTTACCCAGTTGCATTTTGAAGGAGTAAAGAATTTGGAAACATTCAAAAGCCATGGAGAGAGTTTCATATGCTCAGTCCTTCCTGATAGTCCCTACCACCAAATTAAGTTATCCCCTGGAGGGTTCGTTCATTTGAGAGATGGGGCCAACACACAGTATGCCACAGGCACAGCACTCTTGTTCACTGTATATGGTGATCTGCTTGCCAAATATAAACAGACTGTCTCTTGTGGAAACCAACGATTCGGTTCATCCCAACTCCTCAATTTCGCCAAAAAACAAATGGATTACATACTAGGGGAAAACCCAGAAGGAAGATCTTACATGGTAGGGTTTGGGACGAACCCACCGAGACAGGCACACCATAGAGGGGCATCGGTGCCAAAGCTGTCAAAGAATGAAGAGGTGGTCAACTGTGCGTTGACCTTCTCAAAATGGTTCCAAAGAGATCAGCCAAACTTCTATGAGCTGACAGGGGCAATTGTGGGTGGGCCTGACGGCAATGACAAGTTCAATGATAAGCGTTGGGATTCATCCAACACTGAGCCCTGCACTTACATTAATTCCCTTGCTGTTGGTGCTCTTGCAAAGCTTGCGTCTCTCAAATAA 1461 0.4326 MGTQRAHWAIIVVVLWLTLFEGNMMHVNGDFNYKEALTKSLIFLEAQRSGKLPSNNRVPWRGDSALDDGKLANVDLAGGYYDAGDNVKYGLPMAFTVTTLSWAAIFYKSELEAANEMGHVQDAIRWGTDYFLKASSRRQRLYVQVGDPEDDHHCWIRPENMKTKRTVLKIDSSTPGTEIAAETAAAMAASSIVFRHSDYTYAQKILNKAKLLFEMAKSHKGTYDGECPFYCSYSGYNDELLWAATWLYLATNKPMYLTYIKEEAISANVAEFSWDLKYAGAQILLTQLHFEGVKNLETFKSHGESFICSVLPDSPYHQIKLSPGGFVHLRDGANTQYATGTALLFTVYGDLLAKYKQTVSCGNQRFGSSQLLNFAKKQMDYILGENPEGRSYMVGFGTNPPRQAHHRGASVPKLSKNEEVVNCALTFSKWFQRDQPNFYELTGAIVGGPDGNDKFNDKRWDSSNTEPCTYINSLAVGALAKLASLK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0505 486 Pfam Glycosyl hydrolase family 9 33 479 IPR001701 GO:0004553|GO:0005975
Aev08g0505 486 Gene3D - 27 486 IPR012341 GO:0005975
Aev08g0505 486 PANTHER ENDO-1,4-BETA-GLUCANASE 8 483 - -
Aev08g0505 486 SUPERFAMILY Six-hairpin glycosidases 29 484 IPR008928 GO:0005975
Aev08g0505 486 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 381 407 IPR018221 -
Aev08g0505 486 PANTHER ENDOGLUCANASE 16-RELATED 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0505 Aev-Chr8 2827781 2830450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0505 23 484 Glycoside Hydrolase AT3G43860 70.410 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0505 K01179 - gmx:100811509 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0505 08 2827781 2830450 Aev08g0505 08 2827781 2830450 ECH