Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0486 ATGGGGCGTGTTCCGAAGAAGACGAAGCAGAAGAAAGGTAATGGTAATGGTAATGGTAGCAGAGAGGAGAATGAAGACGAAAAGCGTGGACTGAAGGGAGCTGAGAGGTCAGCCTACTTCGCTCGGAGAGAGGCGGCGAAGGTGCTGAGACTGGTTCTCGAAGGTGACGCCAAGAGGCGCGCCCTTGCTTCCATCAAATCCCTAATCTATAAGCCCTCCATCCGAAACAAGAAGGCCACTTTCGCTCTCATTTGCCAAACCCTCAAACATCTTCCCATTATCAAGGATGTCTTAGAAGCTTCTTCTATACTCAACACCAAGTGGAAGAGGCAACAAGAATTGATTTACATCATTCTCTATGATATTCTTTTCGGTCAGGCTGTCTCATTGGTTGGTGATGCAGAGAAGTACCTCATGCGACACAAGGATGCCCTGCACTCAACACTCAAACAGCTTATGTTACAGAAAAATGTGAAGAATGTTAAACAATTGATTGCCCTGCATCAAGTTCCTGGTATTTCTCTGCCTCGTTATGCTCGAGTGAATACACTCAAACTGGATGTTGATTCTGCTTTACTTGAACTTCAGGGAAAATACGAGGTTAGGAAAGATGATTTGCTGCCTGACTTGCTAATACTTCCACCAGGCACAGACTTGCATGATCATCCTCTTGTCAAGAACGGAAGTATCTTTCTGCAAGGGAAGGCGAGTTCCATGGTAGCACCGGCCCTTAACCCTGAACCTGGATGGGAGATTCTTGATGCATGTGCGGCACCAGGAAACAAAACTGTCCACCTTGCTGCCCTTATGAAGAGAAAGGGTAGGATTATTGCATGTGAATTGAATAAAGAAAGGGTTAAGCGTTTGAAAGATACCATCAAGCTATCTGGTGCTTCTAACATACGAGTTCTCAATGAGGACTTCTTGAGCATAGATCCCAAGGCTCCTCCATATTCCAAGGTGCGAGCTATTCTTTTGGATCCTTCCTGCTCTGGTTCTGGTACTTCTGCTTCAAGACTAGACCATCTACTCCCATCTAAAGCAGCAGGCCAAGATACTGACATGGAAAGATTGAACAAGCTTGCAGCTTTTCAGAGAAAGGCTCTTCAGCATGCTTTACTTTTTCCAGCAGTTAAAAAGATTGTCTACAGCACATGTTCGGTCAACCAAATTGAGAATGAAGATGTCATCAATTCTGTTCTGCCCGTCGCCAAATCGTATGGATTTCAACTGGTGAACCCCTTTCCCAAGTGGCACTGTCGTGGTCTTCCAGTGTTTGAAGGCTCTGAGAACCTAATTCGGACAGATCCTGCCAAGGATGGCGAGGGTTTCTTCATTGCTTTGTTTGCCAAGAAAGGTGCCAATAAAGATGGAAGTGGAACTCCTCATAGCTCTTCCAGTACCAGAAATGTGCAAAGGAAGAAACACATTCTTCCTATTATTCATAGTGACCCATTCAGACTGTGGTTGCATACTCATGGGCTGAACCGGCCTAGAAGAAGATCAATAGACAAGAACTGA 1521 0.4523 MGRVPKKTKQKKGNGNGNGSREENEDEKRGLKGAERSAYFARREAAKVLRLVLEGDAKRRALASIKSLIYKPSIRNKKATFALICQTLKHLPIIKDVLEASSILNTKWKRQQELIYIILYDILFGQAVSLVGDAEKYLMRHKDALHSTLKQLMLQKNVKNVKQLIALHQVPGISLPRYARVNTLKLDVDSALLELQGKYEVRKDDLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALNPEPGWEILDACAAPGNKTVHLAALMKRKGRIIACELNKERVKRLKDTIKLSGASNIRVLNEDFLSIDPKAPPYSKVRAILLDPSCSGSGTSASRLDHLLPSKAAGQDTDMERLNKLAAFQRKALQHALLFPAVKKIVYSTCSVNQIENEDVINSVLPVAKSYGFQLVNPFPKWHCRGLPVFEGSENLIRTDPAKDGEGFFIALFAKKGANKDGSGTPHSSSSTRNVQRKKHILPIIHSDPFRLWLHTHGLNRPRRRSIDKN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0486 506 PRINTS RNA (C5-cytosine) methyltransferase signature 322 334 IPR023267 GO:0001510
Aev08g0486 506 PRINTS RNA (C5-cytosine) methyltransferase signature 378 394 IPR023267 GO:0001510
Aev08g0486 506 PRINTS RNA (C5-cytosine) methyltransferase signature 224 238 IPR023267 GO:0001510
Aev08g0486 506 PRINTS RNA (C5-cytosine) methyltransferase signature 434 451 IPR023267 GO:0001510
Aev08g0486 506 PRINTS RNA (C5-cytosine) methyltransferase signature 253 263 IPR023267 GO:0001510
Aev08g0486 506 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 31 480 IPR023267 GO:0001510
Aev08g0486 506 CDD AdoMet_MTases 252 340 - -
Aev08g0486 506 Gene3D Vaccinia Virus protein VP39 233 458 IPR029063 -
Aev08g0486 506 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 175 452 IPR029063 -
Aev08g0486 506 MobiDBLite consensus disorder prediction 454 473 - -
Aev08g0486 506 MobiDBLite consensus disorder prediction 16 31 - -
Aev08g0486 506 Pfam 16S rRNA methyltransferase RsmB/F 243 449 IPR001678 GO:0008168
Aev08g0486 506 PANTHER BNAA09G04380D PROTEIN 31 480 - -
Aev08g0486 506 MobiDBLite consensus disorder prediction 458 473 - -
Aev08g0486 506 MobiDBLite consensus disorder prediction 1 31 - -
Aev08g0486 506 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 167 452 IPR001678 GO:0008168
Aev08g0486 506 Gene3D Sun protein; domain 3 191 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0486 Aev-Chr8 2745957 2749123 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0486 K15264 - gmx:100775620 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0486 08 2745957 2749123 Aev08g0486 08 2745957 2749123 ECH