Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0472 ATGGATTCTTCTCAATCACAAGGGTCTAAGTTAACTGGTTTGATGGAAACTGCATCAATTCAGATGAATGAATCACGTTTGGATGGCGTGCCCATTTATGCTAAGGAGCTAATTGCCGGTGGTTTTGCTGGTGCTCTCTCTAAGACTGTTGTTGCACCCCTTGAACGGGTCAAAATACTCTGGCAGATAAGGACAACAGGATTTCAACCTCTTGGTGTGTGTCAATCCTTGAATAGATTATTCAAGCATGAAGGTTTTCTAGGACTATATAAAGGAAATGGAGCTAGTGTGATTCGGATTGTTCCTTATGCAGCCTTGCATTTTATGGCATATGAGCGGTATAAAAGTTGGATCTTGAACAATTATCCCATGTTAGGATCGGGTCCTGTTGTTGATCTTTTAGCCGGTTCTGCAGGAGGAGGAACTGCAGTCTTATATACATACCCCCTTGATCTTGCTCGTACTAAACTTGCTTATCAGGTGGTGGAGACAAGATCAAGCATTAAAGATGGTGTGAAAGGAGTTCATTCTCAATCTACATGTAGCATTAAAGGTGTACTAACAAGTGTCTATAAAGAAGGGGGAGTTCGTGGACTTTATAGGGGTGTAGGACCAACTATTACTGGAATTCTTCCATATGCTGGTTTAAAATTCTACATGTATGAGAAACTAAAGCTGCACGTACCCGAAGAACATCAAAAGTCCATTTTGATGCAACTTTCTTGTGGAGCTCTAGCTGGGTTGTTTGGCCAGACTTTAACATACCCTTTAGATGTTGTTAAGCGACAAATGCAGGTTGGCAGCCTAGAAAATGCAACTCATGAAGATACCAAATACAAAAATACAGTTGATGGACTTAGGAAAATTGTTAGAAACCAAGGGTGGAGGCAGTTGTTTGCGGGCGTAAGCATCAACTATATAAGGATTGTTCCTACGGCTGCAATTAGTTTCACAACATATGACATAATGAAGACTTGGCTTGGCATACCACCCCAACAAAAGTCTCAATCAATTTCCACAGGATGA 1026 0.4103 MDSSQSQGSKLTGLMETASIQMNESRLDGVPIYAKELIAGGFAGALSKTVVAPLERVKILWQIRTTGFQPLGVCQSLNRLFKHEGFLGLYKGNGASVIRIVPYAALHFMAYERYKSWILNNYPMLGSGPVVDLLAGSAGGGTAVLYTYPLDLARTKLAYQVVETRSSIKDGVKGVHSQSTCSIKGVLTSVYKEGGVRGLYRGVGPTITGILPYAGLKFYMYEKLKLHVPEEHQKSILMQLSCGALAGLFGQTLTYPLDVVKRQMQVGSLENATHEDTKYKNTVDGLRKIVRNQGWRQLFAGVSINYIRIVPTAAISFTTYDIMKTWLGIPPQQKSQSISTG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0472 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 227 IPR018108 -
Aev08g0472 341 SUPERFAMILY Mitochondrial carrier 34 322 IPR023395 -
Aev08g0472 341 Pfam Mitochondrial carrier protein 234 327 IPR018108 -
Aev08g0472 341 Pfam Mitochondrial carrier protein 129 228 IPR018108 -
Aev08g0472 341 Pfam Mitochondrial carrier protein 33 121 IPR018108 -
Aev08g0472 341 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 13 335 - -
Aev08g0472 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 117 IPR018108 -
Aev08g0472 341 PANTHER SOLUTE CARRIER FAMILY 25 13 335 - -
Aev08g0472 341 Gene3D Mitochondrial carrier domain 32 328 IPR023395 -
Aev08g0472 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 326 IPR018108 -
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 243 265 IPR002067 GO:0055085
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Aev08g0472 341 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0472 Aev-Chr8 2658510 2660556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0472 27 309 Organic Solute Cotransporters AT4G26180 56.140 7.96e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0472 - - gmx:100784421 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0472 08 2658510 2660556 Aev08g0472 08 2658510 2660556 ECH